Read the Docs build information Build id: 12402 Project: agipd-manual-mid Version: latest Commit: 36cbd4700cb22ee5d1ccb9a933218864633a602f Date: 2019-09-13T06:29:58.813351Z State: finished Success: True [rtd-command-info] start-time: 2019-09-13T11:30:06.232000Z, end-time: 2019-09-13T11:30:19.860000Z, duration: 13, exit-code: 0 python -mvirtualenv --no-site-packages --no-download /user_builds/agipd-manual-mid/envs/latest New python executable in /user_builds/agipd-manual-mid/envs/latest/bin/python Installing setuptools, pip, wheel...done. [rtd-command-info] start-time: 2019-09-13T11:30:19.933000Z, end-time: 2019-09-13T11:31:57.718000Z, duration: 97, exit-code: 0 python /user_builds/agipd-manual-mid/envs/latest/bin/pip install --use-wheel -U --cache-dir /user_builds/agipd-manual-mid/.cache/pip sphinx==1.3.5 Pygments==2.1.3 setuptools==20.1.1 docutils==0.12 mkdocs==0.15.0 mock==1.0.1 pillow==2.6.1 git+https://github.com/rtfd/readthedocs-sphinx-ext.git@0.6-alpha#egg=readthedocs-sphinx-ext sphinx-rtd-theme==0.1.9 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.5.4 recommonmark==0.1.1 Requirement already up-to-date: sphinx==1.3.5 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: Pygments==2.1.3 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: setuptools==20.1.1 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: docutils==0.12 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: mkdocs==0.15.0 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: mock==1.0.1 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: pillow==2.6.1 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Collecting readthedocs-sphinx-ext from git+https://github.com/rtfd/readthedocs-sphinx-ext.git@0.6-alpha#egg=readthedocs-sphinx-ext Cloning https://github.com/rtfd/readthedocs-sphinx-ext.git (to 0.6-alpha) to /tmp/pip-build-dHCKfa/readthedocs-sphinx-ext Requirement already up-to-date: sphinx-rtd-theme==0.1.9 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: alabaster!=0.7.5,<0.8,>=0.7 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: commonmark==0.5.4 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: recommonmark==0.1.1 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages Collecting babel!=2.0,>=1.3 (from sphinx==1.3.5) Downloading https://files.pythonhosted.org/packages/2c/60/f2af68eb046c5de5b1fe6dd4743bf42c074f7141fe7b2737d3061533b093/Babel-2.7.0-py2.py3-none-any.whl (8.4MB) Collecting snowballstemmer>=1.1 (from sphinx==1.3.5) Downloading https://files.pythonhosted.org/packages/51/16/86a280d59b3bb439e7103ea1a275a191e3d2df8a3543cda0708f7cb4333c/snowballstemmer-1.9.1.tar.gz (82kB) Requirement already up-to-date: six>=1.4 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from sphinx==1.3.5) Requirement already up-to-date: Jinja2>=2.3 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from sphinx==1.3.5) Collecting Markdown>=2.3.1 (from mkdocs==0.15.0) Downloading https://files.pythonhosted.org/packages/c0/4e/fd492e91abdc2d2fcb70ef453064d980688762079397f779758e055f6575/Markdown-3.1.1-py2.py3-none-any.whl (87kB) Requirement already up-to-date: livereload>=2.3.2 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from mkdocs==0.15.0) Collecting PyYAML>=3.10 (from mkdocs==0.15.0) Downloading https://files.pythonhosted.org/packages/e3/e8/b3212641ee2718d556df0f23f78de8303f068fe29cdaa7a91018849582fe/PyYAML-5.1.2.tar.gz (265kB) Collecting tornado>=4.1 (from mkdocs==0.15.0) Downloading https://files.pythonhosted.org/packages/30/78/2d2823598496127b21423baffaa186b668f73cd91887fcef78b6eade136b/tornado-6.0.3.tar.gz (482kB) Requirement already up-to-date: click>=4.0 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from mkdocs==0.15.0) Requirement already up-to-date: mkdocs-bootswatch>=0.1.0 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from mkdocs==0.15.0) Requirement already up-to-date: mkdocs-bootstrap>=0.1.1 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from mkdocs==0.15.0) Requirement already up-to-date: requests in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from readthedocs-sphinx-ext) Requirement already up-to-date: nilsimsa>=0.3.7 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from readthedocs-sphinx-ext) Collecting pytz>=2015.7 (from babel!=2.0,>=1.3->sphinx==1.3.5) Downloading https://files.pythonhosted.org/packages/87/76/46d697698a143e05f77bec5a526bf4e56a0be61d63425b68f4ba553b51f2/pytz-2019.2-py2.py3-none-any.whl (508kB) Requirement already up-to-date: MarkupSafe>=0.23 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from Jinja2>=2.3->sphinx==1.3.5) Requirement already up-to-date: idna<2.9,>=2.5 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from requests->readthedocs-sphinx-ext) Collecting certifi>=2017.4.17 (from requests->readthedocs-sphinx-ext) Downloading https://files.pythonhosted.org/packages/18/b0/8146a4f8dd402f60744fa380bc73ca47303cccf8b9190fd16a827281eac2/certifi-2019.9.11-py2.py3-none-any.whl (154kB) Requirement already up-to-date: chardet<3.1.0,>=3.0.2 in /user_builds/agipd-manual-mid/envs/latest/lib/python2.7/site-packages (from requests->readthedocs-sphinx-ext) Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 (from requests->readthedocs-sphinx-ext) Downloading https://files.pythonhosted.org/packages/e6/60/247f23a7121ae632d62811ba7f273d0e58972d75e58a94d329d51550a47d/urllib3-1.25.3-py2.py3-none-any.whl (150kB) Building wheels for collected packages: snowballstemmer, PyYAML, tornado Running setup.py bdist_wheel for snowballstemmer: started Running setup.py bdist_wheel for snowballstemmer: finished with status 'done' Stored in directory: /user_builds/agipd-manual-mid/.cache/pip/wheels/ae/9b/66/6b8f275ec6dfa2138a56faaf2b4314ca44a4746286560d5578 Running setup.py bdist_wheel for PyYAML: started Running setup.py bdist_wheel for PyYAML: finished with status 'done' Stored in directory: /user_builds/agipd-manual-mid/.cache/pip/wheels/d9/45/dd/65f0b38450c47cf7e5312883deb97d065e030c5cca0a365030 Running setup.py bdist_wheel for tornado: started Running setup.py bdist_wheel for tornado: finished with status 'done' Stored in directory: /user_builds/agipd-manual-mid/.cache/pip/wheels/84/bf/40/2f6ef700f48401ca40e5e3dd7d0e3c0a90e064897b7fe5fc08 Successfully built snowballstemmer PyYAML tornado Installing collected packages: readthedocs-sphinx-ext, pytz, babel, snowballstemmer, Markdown, PyYAML, tornado, certifi, urllib3 Found existing installation: readthedocs-sphinx-ext 0.5.4 Uninstalling readthedocs-sphinx-ext-0.5.4: Successfully uninstalled readthedocs-sphinx-ext-0.5.4 Running setup.py install for readthedocs-sphinx-ext: started Running setup.py install for readthedocs-sphinx-ext: finished with status 'done' Found existing installation: pytz 2019.1 Uninstalling pytz-2019.1: Successfully uninstalled pytz-2019.1 Found existing installation: Babel 2.6.0 Uninstalling Babel-2.6.0: Successfully uninstalled Babel-2.6.0 Found existing installation: snowballstemmer 1.2.1 Uninstalling snowballstemmer-1.2.1: Successfully uninstalled snowballstemmer-1.2.1 Found existing installation: Markdown 3.1 Uninstalling Markdown-3.1: Successfully uninstalled Markdown-3.1 Found existing installation: PyYAML 5.1 Uninstalling PyYAML-5.1: Successfully uninstalled PyYAML-5.1 Found existing installation: tornado 6.0.2 Uninstalling tornado-6.0.2: Successfully uninstalled tornado-6.0.2 Found existing installation: certifi 2019.3.9 Uninstalling certifi-2019.3.9: Successfully uninstalled certifi-2019.3.9 Found existing installation: urllib3 1.25.2 Uninstalling urllib3-1.25.2: Successfully uninstalled urllib3-1.25.2 Successfully installed Markdown-3.1.1 PyYAML-5.1.2 babel-2.7.0 certifi-2019.9.11 pytz-2019.2 readthedocs-sphinx-ext-0.5.4 snowballstemmer-1.9.1 tornado-6.0.3 urllib3-1.25.3 You are using pip version 8.1.1, however version 19.2.3 is available. You should consider upgrading via the 'pip install --upgrade pip' command. [rtd-command-info] start-time: 2019-09-13T11:31:58.647000Z, end-time: 2019-09-13T11:31:58.679000Z, duration: 0, exit-code: 0 cat conf.py # -*- coding: utf-8 -*- # # AGIPD User Manual documentation build configuration file, created by # sphinx-quickstart on Mon Apr 10 12:38:08 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # All configuration values have a default; values that are commented out # serve to show the default. import sys import os # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # documentation root, use os.path.abspath to make it absolute, like shown here. #sys.path.insert(0, os.path.abspath('.')) # -- General configuration ------------------------------------------------ # If your documentation needs a minimal Sphinx version, state it here. #needs_sphinx = '1.0' import sys import os html_theme = 'sphinx_rtd_theme' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'sphinx.ext.autodoc', 'sphinx.ext.intersphinx', 'sphinx.ext.todo', 'sphinx.ext.mathjax', 'sphinx.ext.ifconfig', ] # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # The suffix of source filenames. source_suffix = '.rst' # The encoding of source files. #source_encoding = 'utf-8-sig' # The master toctree document. master_doc = 'index' # General information about the project. project = u'AGIPD at MID User Manual' copyright = u'2017, European XFEL Detector Group' authors = u'Jolanta Sztuk-Dambietz, Friederike Januschek' # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the # built documents. # # The short X.Y version. version = '0.4' # The full version, including alpha/beta/rc tags. release = '0.4 alpha' # The language for content autogenerated by Sphinx. Refer to documentation # for a list of supported languages. #language = None # There are two options for replacing |today|: either, you set today to some # non-false value, then it is used: #today = '' # Else, today_fmt is used as the format for a strftime call. #today_fmt = '%B %d, %Y' # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. exclude_patterns = [] # The reST default role (used for this markup: `text`) to use for all # documents. #default_role = None # If true, '()' will be appended to :func: etc. cross-reference text. #add_function_parentheses = True # If true, the current module name will be prepended to all description # unit titles (such as .. function::). #add_module_names = True # If true, sectionauthor and moduleauthor directives will be shown in the # output. They are ignored by default. show_authors = True # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'sphinx' # A list of ignored prefixes for module index sorting. #modindex_common_prefix = [] # If true, keep warnings as "system message" paragraphs in the built documents. #keep_warnings = False # If true, references (figures) should be numbered and refered to by number numfig = True # -- Options for HTML output ---------------------------------------------- # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. html_theme = 'default' # Theme options are theme-specific and customize the look and feel of a theme # further. For a list of options available for each theme, see the # documentation. #html_theme_options = {} # Add any paths that contain custom themes here, relative to this directory. #html_theme_path = [] # The name for this set of Sphinx documents. If None, it defaults to # " v documentation". #html_title = None # A shorter title for the navigation bar. Default is the same as html_title. #html_short_title = None # The name of an image file (relative to this directory) to place at the top # of the sidebar. #html_logo = None # The name of an image file (within the static path) to use as favicon of the # docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32 # pixels large. #html_favicon = None # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". html_static_path = ['_static'] # Add any extra paths that contain custom files (such as robots.txt or # .htaccess) here, relative to this directory. These files are copied # directly to the root of the documentation. #html_extra_path = [] # If not '', a 'Last updated on:' timestamp is inserted at every page bottom, # using the given strftime format. #html_last_updated_fmt = '%b %d, %Y' # If true, SmartyPants will be used to convert quotes and dashes to # typographically correct entities. #html_use_smartypants = True # Custom sidebar templates, maps document names to template names. #html_sidebars = {} # Additional templates that should be rendered to pages, maps page names to # template names. #html_additional_pages = {} # If false, no module index is generated. #html_domain_indices = True # If false, no index is generated. #html_use_index = True # If true, the index is split into individual pages for each letter. #html_split_index = False # If true, links to the reST sources are added to the pages. #html_show_sourcelink = True # If true, "Created using Sphinx" is shown in the HTML footer. Default is True. #html_show_sphinx = True # If true, "(C) Copyright ..." is shown in the HTML footer. Default is True. #html_show_copyright = True # If true, an OpenSearch description file will be output, and all pages will # contain a tag referring to it. The value of this option must be the # base URL from which the finished HTML is served. #html_use_opensearch = '' # This is the file name suffix for HTML files (e.g. ".xhtml"). #html_file_suffix = None # Output file base name for HTML help builder. htmlhelp_basename = 'SPBAGIPDUserManualdoc' # -- Options for LaTeX output --------------------------------------------- latex_elements = { # The paper size ('letterpaper' or 'a4paper'). #'papersize': 'letterpaper', # The font size ('10pt', '11pt' or '12pt'). #'pointsize': '10pt', # Additional stuff for the LaTeX preamble. #'preamble': '', } # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ ('index', 'SPB-AGIPD_UserManual.tex', u'SPB AGIPD User Manual Documentation', u'European XFEL Detector Group, Jola and Friederike', 'manual'), ] # The name of an image file (relative to this directory) to place at the top of # the title page. #latex_logo = None # For "manual" documents, if this is true, then toplevel headings are parts, # not chapters. #latex_use_parts = False # If true, show page references after internal links. #latex_show_pagerefs = False # If true, show URL addresses after external links. #latex_show_urls = False # Documents to append as an appendix to all manuals. #latex_appendices = [] # If false, no module index is generated. #latex_domain_indices = True # -- Options for manual page output --------------------------------------- # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ ('index', 'agipdusermanual', u'AGIPD User Manual Documentation', [u'European XFEL Detector Group'], 1) ] # If true, show URL addresses after external links. #man_show_urls = False # -- Options for Texinfo output ------------------------------------------- # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ ('index', 'MIDAGIPDUserManual', u'MIDAGIPD User Manual Documentation', u'European XFEL Detector Group', 'MIDAGIPDUserManual', 'One line description of project.', 'Miscellaneous'), ] # Documents to append as an appendix to all manuals. #texinfo_appendices = [] # If false, no module index is generated. #texinfo_domain_indices = True # How to display URL addresses: 'footnote', 'no', or 'inline'. #texinfo_show_urls = 'footnote' # If true, do not generate a @detailmenu in the "Top" node's menu. #texinfo_no_detailmenu = False # Example configuration for intersphinx: refer to the Python standard library. intersphinx_mapping = {'http://docs.python.org/': None} ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # import sys import os.path from six import string_types from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix else: SUFFIX = source_suffix[0] else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') html_static_path.append('/rtd_root/readthedocs/templates/sphinx/_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = False if 'html_theme' in globals(): if html_theme in ['default']: # Allow people to bail with a hack of having an html_style if not 'html_style' in globals(): import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True else: import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.org/websupport' if 'http' not in settings.MEDIA_URL: websupport2_static_url = '/static/' else: websupport2_static_url = '/media//static' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'MEDIA_URL': "/media/", 'PRODUCTION_DOMAIN': "exflrtd.desy.de", 'versions': [ ("latest", "/en/latest/"), ], 'downloads': [ ("pdf", "//exflrtd.desy.de/projects/agipd-manual-mid/downloads/pdf/latest/"), ("htmlzip", "//exflrtd.desy.de/projects/agipd-manual-mid/downloads/htmlzip/latest/"), ("epub", "//exflrtd.desy.de/projects/agipd-manual-mid/downloads/epub/latest/"), ], 'subprojects': [ ], 'slug': 'agipd-manual-mid', 'name': u'AGIPD Manual MID', 'rtd_language': u'en', 'canonical_url': 'http://exflrtd.desy.de/docs/agipd-manual-mid/en/latest/', 'analytics_code': 'None', 'single_version': False, 'conf_py_path': '/source/', 'api_host': 'https://readthedocs.org', 'github_user': 'None', 'github_repo': 'None', 'github_version': 'master', 'display_github': False, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'master', 'display_bitbucket': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'user_analytics_code': '', 'global_analytics_code': 'UA-17997319-1', 'commit': '36cbd470', } if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): extensions.append("readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] [rtd-command-info] start-time: 2019-09-13T11:31:58.816000Z, end-time: 2019-09-13T11:32:20.277000Z, duration: 21, exit-code: 0 python /user_builds/agipd-manual-mid/envs/latest/bin/sphinx-build -T -E -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html Running Sphinx v1.3.5 making output directory... loading translations [en]... done loading intersphinx inventory from http://docs.python.org/objects.inv... building [mo]: targets for 0 po files that are out of date building [readthedocs]: targets for 5 source files that are out of date updating environment: 5 added, 0 changed, 0 removed reading sources... [ 20%] index reading sources... [ 40%] introduction reading sources... [ 60%] starting_detector_mid reading sources... [ 80%] stopping_detector reading sources... [100%] troubleshooting /user_builds/agipd-manual-mid/checkouts/latest/source/index.rst:11: WARNING: toctree contains reference to nonexisting document u'appendix' /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:52: ERROR: Figure caption must be a paragraph or empty comment. .. figure:: ./images/screenshots/agipd_overview_faked.png :width: 110 % The main overview scene for AGIPD /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:150: ERROR: Unknown directive type "coment". .. coment:: Currently the cooling cycle of the Julabo chiller is still leaky. Therefore in the beginning of a shift it should be checked in the rack room, whether the chiller displayes warning 40 (liquid level too low) and has to be refilled. This warning will not appear in Karabo, one has to go to the chiller to check! To refill the chiller the detector has to be warmed up. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:465: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:498: WARNING: Literal block expected; none found. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:554: WARNING: Bullet list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:638: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:56: WARNING: Inline emphasis start-string without end-string. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:250: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:251: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:252: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:254: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:81: WARNING: image file not readable: ./images/screenshots/mpod_u901_trip_.png looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 20%] index writing output... [ 40%] introduction writing output... [ 60%] starting_detector_mid writing output... [ 80%] stopping_detector writing output... [100%] troubleshooting /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:282: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:294: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) generating indices... genindex writing additional pages... search copying images... [ 9%] ./images/screenshots/Screenshot_h5view.png copying images... [ 18%] ./images/agipd_modules.png copying images... [ 27%] ./images/screenshots/agipd-power_23.02.png copying images... [ 36%] ./images/Huber_display.jpg copying images... [ 45%] ./images/screenshots/Screenshot_tags_.png copying images... [ 54%] ./images/screenshots/agipd_overview_faked.png copying images... [ 63%] ./images/huber_wing_chiller.jpg copying images... [ 72%] ./images/agipd_combined.png copying images... [ 81%] ./images/agipd_naming.png copying images... [ 90%] ./images/AGIPDinSAXposition.jpg copying images... [100%] ./images/AGIPD_example_config_p2038.png copying static files... WARNING: html_static_path entry u'/user_builds/agipd-manual-mid/checkouts/latest/source/_static' does not exist WARNING: html_static_path entry '/rtd_root/readthedocs/templates/sphinx/_static' does not exist done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 21 warnings. Copying readthedocs-dynamic-include.js_t... done Copying readthedocs-data.js_t... done Copying searchtools.js_t... done [rtd-command-info] start-time: 2019-09-13T11:32:24.145000Z, end-time: 2019-09-13T11:32:32.647000Z, duration: 8, exit-code: 0 python /user_builds/agipd-manual-mid/envs/latest/bin/sphinx-build -T -b json -d _build/doctrees-json -D language=en . _build/json Running Sphinx v1.3.5 making output directory... loading translations [en]... done loading pickled environment... not yet created loading intersphinx inventory from http://docs.python.org/objects.inv... building [mo]: targets for 0 po files that are out of date building [json]: targets for 5 source files that are out of date updating environment: 5 added, 0 changed, 0 removed reading sources... [ 20%] index reading sources... [ 40%] introduction reading sources... [ 60%] starting_detector_mid reading sources... [ 80%] stopping_detector reading sources... [100%] troubleshooting /user_builds/agipd-manual-mid/checkouts/latest/source/index.rst:11: WARNING: toctree contains reference to nonexisting document u'appendix' /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:52: ERROR: Figure caption must be a paragraph or empty comment. .. figure:: ./images/screenshots/agipd_overview_faked.png :width: 110 % The main overview scene for AGIPD /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:150: ERROR: Unknown directive type "coment". .. coment:: Currently the cooling cycle of the Julabo chiller is still leaky. Therefore in the beginning of a shift it should be checked in the rack room, whether the chiller displayes warning 40 (liquid level too low) and has to be refilled. This warning will not appear in Karabo, one has to go to the chiller to check! To refill the chiller the detector has to be warmed up. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:465: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:498: WARNING: Literal block expected; none found. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:554: WARNING: Bullet list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:638: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:56: WARNING: Inline emphasis start-string without end-string. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:250: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:251: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:252: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:254: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:81: WARNING: image file not readable: ./images/screenshots/mpod_u901_trip_.png looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 20%] index writing output... [ 40%] introduction writing output... [ 60%] starting_detector_mid writing output... [ 80%] stopping_detector writing output... [100%] troubleshooting /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:282: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:294: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) generating indices... genindex writing additional pages... search copying images... [ 9%] ./images/screenshots/Screenshot_h5view.png copying images... [ 18%] ./images/agipd_modules.png copying images... [ 27%] ./images/screenshots/agipd-power_23.02.png copying images... [ 36%] ./images/Huber_display.jpg copying images... [ 45%] ./images/screenshots/Screenshot_tags_.png copying images... [ 54%] ./images/screenshots/agipd_overview_faked.png copying images... [ 63%] ./images/huber_wing_chiller.jpg copying images... [ 72%] ./images/agipd_combined.png copying images... [ 81%] ./images/agipd_naming.png copying images... [ 90%] ./images/AGIPDinSAXposition.jpg copying images... [100%] ./images/AGIPD_example_config_p2038.png copying static files... WARNING: html_static_path entry u'/user_builds/agipd-manual-mid/checkouts/latest/source/_static' does not exist WARNING: html_static_path entry '/rtd_root/readthedocs/templates/sphinx/_static' does not exist done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 21 warnings. [rtd-command-info] start-time: 2019-09-13T11:32:33.799000Z, end-time: 2019-09-13T11:32:42.496000Z, duration: 8, exit-code: 0 python /user_builds/agipd-manual-mid/envs/latest/bin/sphinx-build -T -b readthedocssinglehtmllocalmedia -d _build/doctrees-readthedocssinglehtmllocalmedia -D language=en . _build/localmedia Running Sphinx v1.3.5 making output directory... loading translations [en]... done loading pickled environment... not yet created loading intersphinx inventory from http://docs.python.org/objects.inv... building [mo]: targets for 0 po files that are out of date building [readthedocssinglehtmllocalmedia]: all documents updating environment: 5 added, 0 changed, 0 removed reading sources... [ 20%] index reading sources... [ 40%] introduction reading sources... [ 60%] starting_detector_mid reading sources... [ 80%] stopping_detector reading sources... [100%] troubleshooting /user_builds/agipd-manual-mid/checkouts/latest/source/index.rst:11: WARNING: toctree contains reference to nonexisting document u'appendix' /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:52: ERROR: Figure caption must be a paragraph or empty comment. .. figure:: ./images/screenshots/agipd_overview_faked.png :width: 110 % The main overview scene for AGIPD /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:150: ERROR: Unknown directive type "coment". .. coment:: Currently the cooling cycle of the Julabo chiller is still leaky. Therefore in the beginning of a shift it should be checked in the rack room, whether the chiller displayes warning 40 (liquid level too low) and has to be refilled. This warning will not appear in Karabo, one has to go to the chiller to check! To refill the chiller the detector has to be warmed up. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:465: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:498: WARNING: Literal block expected; none found. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:554: WARNING: Bullet list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:638: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:56: WARNING: Inline emphasis start-string without end-string. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:250: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:251: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:252: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:254: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:81: WARNING: image file not readable: ./images/screenshots/mpod_u901_trip_.png looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done assembling single document... introduction starting_detector_mid stopping_detector troubleshooting /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:282: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:294: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) writing... done writing additional files... copying images... [ 9%] ./images/screenshots/Screenshot_h5view.png copying images... [ 18%] ./images/agipd_modules.png copying images... [ 27%] ./images/screenshots/agipd-power_23.02.png copying images... [ 36%] ./images/Huber_display.jpg copying images... [ 45%] ./images/screenshots/Screenshot_tags_.png copying images... [ 54%] ./images/screenshots/agipd_overview_faked.png copying images... [ 63%] ./images/huber_wing_chiller.jpg copying images... [ 72%] ./images/agipd_combined.png copying images... [ 81%] ./images/agipd_naming.png copying images... [ 90%] ./images/AGIPDinSAXposition.jpg copying images... [100%] ./images/AGIPD_example_config_p2038.png copying static files... WARNING: html_static_path entry u'/user_builds/agipd-manual-mid/checkouts/latest/source/_static' does not exist WARNING: html_static_path entry '/rtd_root/readthedocs/templates/sphinx/_static' does not exist done copying extra files... done dumping object inventory... done build succeeded, 21 warnings. [rtd-command-info] start-time: 2019-09-13T11:32:43.227000Z, end-time: 2019-09-13T11:32:50.857000Z, duration: 7, exit-code: 0 python /user_builds/agipd-manual-mid/envs/latest/bin/sphinx-build -b latex -D language=en -d _build/doctrees . _build/latex Running Sphinx v1.3.5 making output directory... loading translations [en]... done loading pickled environment... not yet created loading intersphinx inventory from http://docs.python.org/objects.inv... building [mo]: targets for 0 po files that are out of date building [latex]: all documents updating environment: 5 added, 0 changed, 0 removed reading sources... [ 20%] index reading sources... [ 40%] introduction reading sources... [ 60%] starting_detector_mid reading sources... [ 80%] stopping_detector reading sources... [100%] troubleshooting /user_builds/agipd-manual-mid/checkouts/latest/source/index.rst:11: WARNING: toctree contains reference to nonexisting document u'appendix' /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:52: ERROR: Figure caption must be a paragraph or empty comment. .. figure:: ./images/screenshots/agipd_overview_faked.png :width: 110 % The main overview scene for AGIPD /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:150: ERROR: Unknown directive type "coment". .. coment:: Currently the cooling cycle of the Julabo chiller is still leaky. Therefore in the beginning of a shift it should be checked in the rack room, whether the chiller displayes warning 40 (liquid level too low) and has to be refilled. This warning will not appear in Karabo, one has to go to the chiller to check! To refill the chiller the detector has to be warmed up. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:465: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:498: WARNING: Literal block expected; none found. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:554: WARNING: Bullet list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:638: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:56: WARNING: Inline emphasis start-string without end-string. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:250: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:251: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:252: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:254: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:81: WARNING: image file not readable: ./images/screenshots/mpod_u901_trip_.png looking for now-outdated files... none found pickling environment... done checking consistency... done processing SPB-AGIPD_UserManual.tex... index introduction starting_detector_mid stopping_detector troubleshooting resolving references... /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:282: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:294: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) writing... done copying images... ./images/screenshots/Screenshot_h5view.png ./images/agipd_modules.png ./images/screenshots/agipd-power_23.02.png ./images/Huber_display.jpg ./images/screenshots/Screenshot_tags_.png ./images/screenshots/agipd_overview_faked.png ./images/huber_wing_chiller.jpg ./images/agipd_combined.png ./images/agipd_naming.png ./images/AGIPDinSAXposition.jpg ./images/AGIPD_example_config_p2038.png copying TeX support files... done build succeeded, 19 warnings. [rtd-command-info] start-time: 2019-09-13T11:32:50.921000Z, end-time: 2019-09-13T11:32:53.444000Z, duration: 2, exit-code: 0 pdflatex -interaction=nonstopmode /user_builds/agipd-manual-mid/checkouts/latest/source/_build/latex/SPB-AGIPD_UserManual.tex This is pdfTeX, Version 3.14159265-2.6-1.40.15 (TeX Live 2015/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (/user_builds/agipd-manual-mid/checkouts/latest/source/_build/latex/SPB-AGIPD_U serManual.tex LaTeX2e <2014/05/01> Babel <3.9l> and hyphenation patterns for 2 languages loaded. 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(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) Underfull \hbox (badness 10000) in paragraph at lines 181--182 []\T1/ptm/m/n/10 Mpod power sup-plies for low and high volt-age of the de-tec-t or: Underfull \hbox (badness 10000) in paragraph at lines 181--182 [][]\T1/ptm/m/n/10 https://docs.xfel.eu/share/page/site/agipd/document-details? nodeRef=workspace://SpacesStore/3dfffbe2- Underfull \hbox (badness 10000) in paragraph at lines 187--188 []\T1/ptm/m/n/10 Julabo Chiller (in-vacuum cool-ing): [][]https://docs.xfel.eu/ share/page/site/agipd/document- [3 <./AGIPDinSAXposition.jpg>] Overfull \hbox (186.61783pt too wide) in paragraph at lines 196--197 []\T1/ptm/m/n/10 Clock & Con-trol: [][]https://docs.xfel.eu/alfresco/webdav/Sit es/advancedElectronics/documentLibrary/FPGA/Clock%20and%20Control/clockControlP roject.pdf[][] Overfull \hbox (13.89911pt too wide) in paragraph at lines 214--216 \T1/ptm/m/n/10 There is an elec-tronic log-book for the MID-AGIPD de-tec-tor: [ ][]https://in.xfel.eu/elog/1+MPix+AGIPD+Detector+for+MID/[][] LaTeX Warning: Hyper reference `introduction:fignaming' on page 4 undefined on input line 225. 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[7] LaTeX Warning: Hyper reference `introduction:figmodulsandnodes' on page 8 undef ined on input line 389. LaTeX Warning: Reference `introduction:figmodulsandnodes' on page 8 undefined o n input line 389. [8 <./AGIPD_example_config_p2038.png>] Chapter 3. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) LaTeX Warning: Hyper reference `starting_detector_mid:figoverview' on page 9 un defined on input line 454. LaTeX Warning: Reference `starting_detector_mid:figoverview' on page 9 undefine d on input line 454. Overfull \hbox (46.97836pt too wide) in paragraph at lines 458--459 [][] [9] [10 <./agipd_overview_faked.png (PNG copy)>] LaTeX Warning: Hyper reference `introduction:figscenexample' on page 11 undefin ed on input line 505. LaTeX Warning: Reference `introduction:figscenexample' on page 11 undefined on input line 505. LaTeX Warning: Hyper reference `starting_detector_mid:figcombi' on page 11 unde fined on input line 510. 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LaTeX Warning: Reference `introduction:figmodulsandnodes' on page 17 undefined on input line 766. [17] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [18] [19] [20] LaTeX Warning: Hyper reference `starting_detector_mid:data-check' on page 21 un defined on input line 1131. LaTeX Warning: Hyper reference `introduction:figscenexample' on page 21 undefin ed on input line 1167. LaTeX Warning: Reference `introduction:figscenexample' on page 21 undefined on input line 1167. [21] LaTeX Warning: Hyper reference `starting_detector_mid:figoverview' on page 22 u ndefined on input line 1203. LaTeX Warning: Reference `starting_detector_mid:figoverview' on page 22 undefin ed on input line 1203. Underfull \hbox (badness 8075) in paragraph at lines 1213--1214 []\T1/ptm/m/n/10 In the left win-dow, which dis-plays the file struc-ture, nav- i-gate to: IN-STRU-MENT -> LaTeX Warning: Hyper reference `starting_detector_mid:figh5view' on page 22 und efined on input line 1216. LaTeX Warning: Reference `starting_detector_mid:figh5view' on page 22 undefined on input line 1216. [22] [23 <./Screenshot_h5view.png>] [24] Chapter 4. LaTeX Warning: Hyper reference `starting_detector_mid:figmpodfeedback' on page 25 undefined on input line 1264. LaTeX Warning: Reference `starting_detector_mid:figmpodfeedback' on page 25 und efined on input line 1264. [25] [26] Chapter 5. Overfull \hbox (47.79906pt too wide) in paragraph at lines 1366--1367 []\T1/ptm/m/n/10 for the DAQ: [][]https://in.xfel.eu/readthedocs/docs/detector- support/en/latest/diagnosis/generic/gen_daq_troubleshooting.html[][] Overfull \hbox (94.37802pt too wide) in paragraph at lines 1369--1370 []\T1/ptm/m/n/10 for the on-line pre-view: [][]https://in.xfel.eu/readthedocs/d ocs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.htm l[][] LaTeX Warning: Hyper reference `troubleshooting:interlock-issues' on page 27 un defined on input line 1398. [27] LaTeX Warning: Hyper reference `troubleshooting:tags' on page 28 undefined on i nput line 1432. LaTeX Warning: Reference `troubleshooting:tags' on page 28 undefined on input l ine 1432. LaTeX Warning: File `{./images/screenshots/mpod_u901_trip_}.png' not found on i nput line 1457. ! Package pdftex.def Error: File `./images/screenshots/mpod_u901_trip_.png' not found. See the pdftex.def package documentation for explanation. Type H for immediate help. ... l.1457 ...images/screenshots/mpod_u901_trip_}.png} LaTeX Warning: File `{./images/screenshots/mpod_u901_trip_}.png' not found on i nput line 1457. ! Package pdftex.def Error: File `./images/screenshots/mpod_u901_trip_.png' not found. See the pdftex.def package documentation for explanation. Type H for immediate help. ... l.1457 ...images/screenshots/mpod_u901_trip_}.png} [28 <./Screenshot_tags_.png>] LaTeX Warning: Hyper reference `troubleshooting:power-issues' on page 29 undefi ned on input line 1514. LaTeX Warning: Hyper reference `starting_detector_mid:manual-power' on page 29 undefined on input line 1539. LaTeX Warning: Hyper reference `starting_detector_mid:automatic-power' on page 29 undefined on input line 1551. Underfull \hbox (badness 10000) in paragraph at lines 1566--1567 []\T1/ptm/m/n/10 if the ob-served er-ror is: Failed on task run_det be-cause: < class [29] LaTeX Warning: Hyper reference `troubleshooting:rundeck' on page 30 undefined o n input line 1590. LaTeX Warning: Hyper reference `troubleshooting:mfpga-noupdate' on page 30 unde fined on input line 1617. LaTeX Warning: Hyper reference `troubleshooting:stopped-66' on page 30 undefine d on input line 1620. LaTeX Warning: Hyper reference `troubleshooting:keeps-running' on page 30 undef ined on input line 1626. [30] LaTeX Warning: Hyper reference `introduction:figmodulsandnodes' on page 31 unde fined on input line 1734. LaTeX Warning: Reference `introduction:figmodulsandnodes' on page 31 undefined on input line 1734. [31] LaTeX Warning: Hyper reference `troubleshooting:h1h2-notsending' on page 32 und efined on input line 1754. [32] Underfull \hbox (badness 10000) in paragraph at lines 1842--1845 LaTeX Warning: Hyper reference `troubleshooting:interlock-issues' on page 33 un defined on input line 1866. LaTeX Warning: Hyper reference `troubleshooting:cooling-issues' on page 33 unde fined on input line 1879. Underfull \hbox (badness 10000) in paragraph at lines 1883--1886 No file SPB-AGIPD_UserManual.ind. [33] (./SPB-AGIPD_UserManual.aux) Package rerunfilecheck Warning: File `SPB-AGIPD_UserManual.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on SPB-AGIPD_UserManual.pdf (37 pages, 4828459 bytes). Transcript written on SPB-AGIPD_UserManual.log. [rtd-command-info] start-time: 2019-09-13T11:32:53.520000Z, end-time: 2019-09-13T11:32:53.583000Z, duration: 0, exit-code: 0 makeindex -s python.ist SPB-AGIPD_UserManual.idx This is makeindex, version 2.15 [TeX Live 2015/dev] (kpathsea + Thai support). Scanning style file ./python.ist......done (6 attributes redefined, 0 ignored). Scanning input file SPB-AGIPD_UserManual.idx...done (0 entries accepted, 0 rejected). Nothing written in SPB-AGIPD_UserManual.ind. Transcript written in SPB-AGIPD_UserManual.ilg. [rtd-command-info] start-time: 2019-09-13T11:32:53.643000Z, end-time: 2019-09-13T11:32:56.524000Z, duration: 2, exit-code: 0 pdflatex -interaction=nonstopmode /user_builds/agipd-manual-mid/checkouts/latest/source/_build/latex/SPB-AGIPD_UserManual.tex This is pdfTeX, Version 3.14159265-2.6-1.40.15 (TeX Live 2015/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (/user_builds/agipd-manual-mid/checkouts/latest/source/_build/latex/SPB-AGIPD_U serManual.tex LaTeX2e <2014/05/01> Babel <3.9l> and hyphenation patterns for 2 languages loaded. 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[1] [2] [1] [2] Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) Underfull \hbox (badness 10000) in paragraph at lines 181--182 []\T1/ptm/m/n/10 Mpod power sup-plies for low and high volt-age of the de-tec-t or: Underfull \hbox (badness 10000) in paragraph at lines 181--182 [][]\T1/ptm/m/n/10 https://docs.xfel.eu/share/page/site/agipd/document-details? nodeRef=workspace://SpacesStore/3dfffbe2- Underfull \hbox (badness 10000) in paragraph at lines 187--188 []\T1/ptm/m/n/10 Julabo Chiller (in-vacuum cool-ing): [][]https://docs.xfel.eu/ share/page/site/agipd/document- [3 <./AGIPDinSAXposition.jpg>] Overfull \hbox (186.61783pt too wide) in paragraph at lines 196--197 []\T1/ptm/m/n/10 Clock & Con-trol: [][]https://docs.xfel.eu/alfresco/webdav/Sit es/advancedElectronics/documentLibrary/FPGA/Clock%20and%20Control/clockControlP roject.pdf[][] Overfull \hbox (13.89911pt too wide) in paragraph at lines 214--216 \T1/ptm/m/n/10 There is an elec-tronic log-book for the MID-AGIPD de-tec-tor: [ ][]https://in.xfel.eu/elog/1+MPix+AGIPD+Detector+for+MID/[][] [4] [5 <./agipd_naming.png>] [6 <./agipd_modules.png>] Chapter 2. [7] [8 <./AGIPD_example_config_p2038.png>] Chapter 3. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) Overfull \hbox (46.97836pt too wide) in paragraph at lines 458--459 [][] [9] [10 <./agipd_overview_faked.png (PNG copy)>] [11 <./agipd_combined.png>] [12 <./huber_wing_chiller.j pg> <./Huber_display.jpg>] [13] [14] [15] [16 <./agipd-power_23.02.png>] [17] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [18] [19] [20] [21] Underfull \hbox (badness 8075) in paragraph at lines 1213--1214 []\T1/ptm/m/n/10 In the left win-dow, which dis-plays the file struc-ture, nav- i-gate to: IN-STRU-MENT -> [22] [23 <./Screenshot_h5view.png>] [24] Chapter 4. [25] [26] Chapter 5. Overfull \hbox (47.79906pt too wide) in paragraph at lines 1366--1367 []\T1/ptm/m/n/10 for the DAQ: [][]https://in.xfel.eu/readthedocs/docs/detector- support/en/latest/diagnosis/generic/gen_daq_troubleshooting.html[][] Overfull \hbox (94.37802pt too wide) in paragraph at lines 1369--1370 []\T1/ptm/m/n/10 for the on-line pre-view: [][]https://in.xfel.eu/readthedocs/d ocs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.htm l[][] [27] LaTeX Warning: File `{./images/screenshots/mpod_u901_trip_}.png' not found on i nput line 1457. ! Package pdftex.def Error: File `./images/screenshots/mpod_u901_trip_.png' not found. See the pdftex.def package documentation for explanation. Type H for immediate help. ... l.1457 ...images/screenshots/mpod_u901_trip_}.png} LaTeX Warning: File `{./images/screenshots/mpod_u901_trip_}.png' not found on i nput line 1457. ! Package pdftex.def Error: File `./images/screenshots/mpod_u901_trip_.png' not found. See the pdftex.def package documentation for explanation. Type H for immediate help. ... l.1457 ...images/screenshots/mpod_u901_trip_}.png} [28 <./Screenshot_tags_.png>] Underfull \hbox (badness 10000) in paragraph at lines 1566--1567 []\T1/ptm/m/n/10 if the ob-served er-ror is: Failed on task run_det be-cause: < class [29] [30] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 1842--1845 Underfull \hbox (badness 10000) in paragraph at lines 1883--1886 (./SPB-AGIPD_UserManual.ind) [33] (./SPB-AGIPD_UserManual.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on SPB-AGIPD_UserManual.pdf (37 pages, 4833904 bytes). Transcript written on SPB-AGIPD_UserManual.log. [rtd-command-info] start-time: 2019-09-13T11:32:56.595000Z, end-time: 2019-09-13T11:32:56.639000Z, duration: 0, exit-code: 0 mv -f /user_builds/agipd-manual-mid/checkouts/latest/source/_build/latex/SPB-AGIPD_UserManual.pdf /user_builds/agipd-manual-mid/artifacts/latest/sphinx_pdf/agipd-manual-mid.pdf [rtd-command-info] start-time: 2019-09-13T11:32:57.048000Z, end-time: 2019-09-13T11:33:06.782000Z, duration: 9, exit-code: 0 python /user_builds/agipd-manual-mid/envs/latest/bin/sphinx-build -T -b epub -d _build/doctrees-epub -D language=en . _build/epub Running Sphinx v1.3.5 making output directory... loading translations [en]... done loading pickled environment... not yet created loading intersphinx inventory from http://docs.python.org/objects.inv... building [mo]: targets for 0 po files that are out of date building [epub]: targets for 5 source files that are out of date updating environment: 5 added, 0 changed, 0 removed reading sources... [ 20%] index reading sources... [ 40%] introduction reading sources... [ 60%] starting_detector_mid reading sources... [ 80%] stopping_detector reading sources... [100%] troubleshooting /user_builds/agipd-manual-mid/checkouts/latest/source/index.rst:11: WARNING: toctree contains reference to nonexisting document u'appendix' /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:52: ERROR: Figure caption must be a paragraph or empty comment. .. figure:: ./images/screenshots/agipd_overview_faked.png :width: 110 % The main overview scene for AGIPD /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:150: ERROR: Unknown directive type "coment". .. coment:: Currently the cooling cycle of the Julabo chiller is still leaky. Therefore in the beginning of a shift it should be checked in the rack room, whether the chiller displayes warning 40 (liquid level too low) and has to be refilled. This warning will not appear in Karabo, one has to go to the chiller to check! To refill the chiller the detector has to be warmed up. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:465: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:498: WARNING: Literal block expected; none found. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:554: WARNING: Bullet list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/starting_detector_mid.rst:638: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/stopping_detector.rst:63: WARNING: Title underline too short. Switching off Huber Unichiller -------------------------- /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:56: WARNING: Inline emphasis start-string without end-string. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:245: WARNING: Title underline too short. Verify with Rundeck, that the detector is not sending data __________________________________________ /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:250: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:251: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:252: WARNING: Enumerated list ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:254: WARNING: Block quote ends without a blank line; unexpected unindent. /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:81: WARNING: image file not readable: ./images/screenshots/mpod_u901_trip_.png looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 20%] index writing output... [ 40%] introduction writing output... [ 60%] starting_detector_mid writing output... [ 80%] stopping_detector writing output... [100%] troubleshooting /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:282: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) /user_builds/agipd-manual-mid/checkouts/latest/source/troubleshooting.rst:294: WARNING: undefined label: https://in.xfel.eu/readthedocs/docs/detector-support/en/latest/diagnosis/generic/cal_online_troubleshooting.html (if the link has no caption the label must precede a section header) generating indices... genindex writing additional pages... search copying images... [ 9%] ./images/screenshots/Screenshot_h5view.png copying images... [ 18%] ./images/agipd_modules.png copying images... 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[rtd-command-info] start-time: 2019-09-13T11:33:06.854000Z, end-time: 2019-09-13T11:33:06.892000Z, duration: 0, exit-code: 0 mv -f /user_builds/agipd-manual-mid/checkouts/latest/source/_build/epub/AGIPDatMIDUserManual.epub /user_builds/agipd-manual-mid/artifacts/latest/sphinx_epub/agipd-manual-mid.epub