Read the Docs build information Build id: 18054 Project: data-analysis-newsletter Version: master Commit: 7c4e2d05f8764a950478f5ddb9a547c54d2ce114 Date: 2020-07-17T05:28:16.554757Z State: finished Success: True [rtd-command-info] start-time: 2020-07-17T10:28:19.959000Z, end-time: 2020-07-17T10:28:34.236000Z, duration: 14, exit-code: 0 python3 -mvirtualenv --no-site-packages --no-download /user_builds/data-analysis-newsletter/envs/master Using base prefix '/usr' New python executable in /user_builds/data-analysis-newsletter/envs/master/bin/python3 Also creating executable in /user_builds/data-analysis-newsletter/envs/master/bin/python Installing setuptools, pip, wheel...done. [rtd-command-info] start-time: 2020-07-17T10:28:34.306000Z, end-time: 2020-07-17T10:29:52.557000Z, duration: 78, exit-code: 0 python /user_builds/data-analysis-newsletter/envs/master/bin/pip install --use-wheel -U --cache-dir /user_builds/data-analysis-newsletter/.cache/pip sphinx==1.3.5 Pygments==2.1.3 setuptools==20.1.1 docutils==0.12 mkdocs==0.15.0 PyYAML==5.2 mock==1.0.1 pillow==2.6.1 git+https://github.com/rtfd/readthedocs-sphinx-ext.git@0.6-alpha#egg=readthedocs-sphinx-ext sphinx-rtd-theme==0.1.9 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.5.4 recommonmark==0.1.1 Collecting sphinx==1.3.5 Using cached https://files.pythonhosted.org/packages/ff/91/45883bc962bda1be7e78039b41cc15e1eb3327ec75679eedd067b5d07bd5/Sphinx-1.3.5-py2.py3-none-any.whl Collecting Pygments==2.1.3 Using cached https://files.pythonhosted.org/packages/9e/d0/d692085518c6a2dc875fe421c866fb6a08e0d9796ca507803c1e545fa116/Pygments-2.1.3-py2.py3-none-any.whl Collecting setuptools==20.1.1 Using cached 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https://files.pythonhosted.org/packages/01/11/525b02e4acc0c747de8b6ccdab376331597c569c42ea66ab0a1dbd36eca2/urllib3-1.24.3-py2.py3-none-any.whl Collecting certifi>=2017.4.17 (from requests->readthedocs-sphinx-ext) Using cached https://files.pythonhosted.org/packages/5e/c4/6c4fe722df5343c33226f0b4e0bb042e4dc13483228b4718baf286f86d87/certifi-2020.6.20-py2.py3-none-any.whl Installing collected packages: Pygments, alabaster, sphinx-rtd-theme, pytz, babel, six, snowballstemmer, MarkupSafe, Jinja2, docutils, sphinx, setuptools, mkdocs-bootstrap, mkdocs-bootswatch, click, backports-abc, tornado, livereload, PyYAML, Markdown, mkdocs, mock, pillow, chardet, idna, urllib3, certifi, requests, nilsimsa, readthedocs-sphinx-ext, commonmark, recommonmark Found existing installation: setuptools 28.8.0 Uninstalling setuptools-28.8.0: Successfully uninstalled setuptools-28.8.0 Running setup.py install for readthedocs-sphinx-ext: started Running setup.py install for readthedocs-sphinx-ext: finished with status 'done' Successfully installed Jinja2-2.10.3 Markdown-3.0.1 MarkupSafe-1.1.1 PyYAML-5.2 Pygments-2.1.3 alabaster-0.7.12 babel-2.8.0 backports-abc-0.5 certifi-2020.6.20 chardet-3.0.4 click-7.0 commonmark-0.5.4 docutils-0.12 idna-2.8 livereload-2.6.2 mkdocs-0.15.0 mkdocs-bootstrap-1.0.1 mkdocs-bootswatch-1.0 mock-1.0.1 nilsimsa-0.3.8 pillow-2.6.1 pytz-2020.1 readthedocs-sphinx-ext-0.5.4 recommonmark-0.1.1 requests-2.21.0 setuptools-20.1.1 six-1.15.0 snowballstemmer-2.0.0 sphinx-1.3.5 sphinx-rtd-theme-0.1.9 tornado-5.1.1 urllib3-1.24.3 You are using pip version 9.0.1, however version 20.1.1 is available. You should consider upgrading via the 'pip install --upgrade pip' command. [rtd-command-info] start-time: 2020-07-17T10:29:52.965000Z, end-time: 2020-07-17T10:29:52.985000Z, duration: 0, exit-code: 0 cat conf.py # Configuration file for the Sphinx documentation builder. # # This file only contains a selection of the most common options. For a full # list see the documentation: # https://www.sphinx-doc.org/en/master/usage/configuration.html # -- Path setup -------------------------------------------------------------- # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # documentation root, use os.path.abspath to make it absolute, like shown here. # # import os # import sys # sys.path.insert(0, os.path.abspath('.')) # -- Project information ----------------------------------------------------- project = 'DA newsletter' copyright = '2020, DA' author = 'DA' # -- General configuration --------------------------------------------------- # The master toctree document. master_doc = 'index' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ ] # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This pattern also affects html_static_path and html_extra_path. exclude_patterns = [] # -- Options for HTML output ------------------------------------------------- # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. # html_theme = 'sphinx_rtd_theme' # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". html_static_path = ['_static'] ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # import sys import os.path from six import string_types from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix else: SUFFIX = source_suffix[0] else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') html_static_path.append('/rtd_root/readthedocs/templates/sphinx/_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = False if 'html_theme' in globals(): if html_theme in ['default']: # Allow people to bail with a hack of having an html_style if not 'html_style' in globals(): import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True else: import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.org/websupport' if 'http' not in settings.MEDIA_URL: websupport2_static_url = '/static/' else: websupport2_static_url = '/media//static' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "master", 'MEDIA_URL': "/media/", 'PRODUCTION_DOMAIN': "exflrtd.desy.de", 'versions': [ ("latest", "/en/latest/"), ("master", "/en/master/"), ("issue-2020-07", "/en/issue-2020-07/"), ("draft", "/en/draft/"), ], 'downloads': [ ], 'subprojects': [ ], 'slug': 'data-analysis-newsletter', 'name': u'Data analysis newsletter', 'rtd_language': u'en', 'canonical_url': 'http://exflrtd.desy.de/docs/data-analysis-newsletter/en/latest/', 'analytics_code': '', 'single_version': False, 'conf_py_path': '/source/', 'api_host': 'https://readthedocs.org', 'github_user': 'None', 'github_repo': 'None', 'github_version': 'master', 'display_github': False, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'master', 'display_bitbucket': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'user_analytics_code': '', 'global_analytics_code': 'UA-17997319-1', 'commit': '7c4e2d05', } if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): extensions.append("readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] [rtd-command-info] start-time: 2020-07-17T10:29:53.044000Z, end-time: 2020-07-17T10:30:02.137000Z, duration: 9, exit-code: 0 python /user_builds/data-analysis-newsletter/envs/master/bin/sphinx-build -T -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html Running Sphinx v1.3.5 making output directory... loading translations [en]... done loading pickled environment... not yet created building [mo]: targets for 0 po files that are out of date building [readthedocs]: targets for 5 source files that are out of date updating environment: 5 added, 0 changed, 0 removed reading sources... [ 20%] article-EXtra-data-1.2 reading sources... [ 40%] article-da-docs reading sources... [ 60%] article-oscovida-intro reading sources... [ 80%] index reading sources... [100%] issue-2020-07 looking for now-outdated files... none found pickling environment... done checking consistency... /user_builds/data-analysis-newsletter/checkouts/master/source/article-EXtra-data-1.2.rst:: WARNING: document isn't included in any toctree /user_builds/data-analysis-newsletter/checkouts/master/source/article-da-docs.rst:: WARNING: document isn't included in any toctree /user_builds/data-analysis-newsletter/checkouts/master/source/article-oscovida-intro.rst:: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 20%] article-EXtra-data-1.2 writing output... [ 40%] article-da-docs writing output... [ 60%] article-oscovida-intro writing output... [ 80%] index writing output... [100%] issue-2020-07 generating indices... genindex writing additional pages... search copying images... [100%] _static/validate-run.gif copying static files... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 3 warnings. Copying readthedocs-dynamic-include.js_t... done Copying readthedocs-data.js_t... done Copying searchtools.js_t... done [rtd-command-info] start-time: 2020-07-17T10:30:04.230000Z, end-time: 2020-07-17T10:30:09.703000Z, duration: 5, exit-code: 0 python /user_builds/data-analysis-newsletter/envs/master/bin/sphinx-build -T -b json -d _build/doctrees-json -D language=en . _build/json Running Sphinx v1.3.5 making output directory... loading translations [en]... done loading pickled environment... not yet created building [mo]: targets for 0 po files that are out of date building [json]: targets for 5 source files that are out of date updating environment: 5 added, 0 changed, 0 removed reading sources... [ 20%] article-EXtra-data-1.2 reading sources... [ 40%] article-da-docs reading sources... [ 60%] article-oscovida-intro reading sources... [ 80%] index reading sources... [100%] issue-2020-07 looking for now-outdated files... none found pickling environment... done checking consistency... /user_builds/data-analysis-newsletter/checkouts/master/source/article-EXtra-data-1.2.rst:: WARNING: document isn't included in any toctree /user_builds/data-analysis-newsletter/checkouts/master/source/article-da-docs.rst:: WARNING: document isn't included in any toctree /user_builds/data-analysis-newsletter/checkouts/master/source/article-oscovida-intro.rst:: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 20%] article-EXtra-data-1.2 writing output... [ 40%] article-da-docs writing output... [ 60%] article-oscovida-intro writing output... [ 80%] index writing output... [100%] issue-2020-07 generating indices... genindex writing additional pages... search copying images... [100%] _static/validate-run.gif copying static files... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 3 warnings. [rtd-command-info] start-time: 2020-07-17T10:30:10.197000Z, end-time: 2020-07-17T10:30:15.415000Z, duration: 5, exit-code: 0 python /user_builds/data-analysis-newsletter/envs/master/bin/sphinx-build -T -b readthedocssinglehtmllocalmedia -d _build/doctrees-readthedocssinglehtmllocalmedia -D language=en . _build/localmedia Running Sphinx v1.3.5 making output directory... loading translations [en]... done loading pickled environment... not yet created building [mo]: targets for 0 po files that are out of date building [readthedocssinglehtmllocalmedia]: all documents updating environment: 5 added, 0 changed, 0 removed reading sources... [ 20%] article-EXtra-data-1.2 reading sources... [ 40%] article-da-docs reading sources... [ 60%] article-oscovida-intro reading sources... [ 80%] index reading sources... [100%] issue-2020-07 looking for now-outdated files... none found pickling environment... done checking consistency... /user_builds/data-analysis-newsletter/checkouts/master/source/article-EXtra-data-1.2.rst:: WARNING: document isn't included in any toctree /user_builds/data-analysis-newsletter/checkouts/master/source/article-da-docs.rst:: WARNING: document isn't included in any toctree /user_builds/data-analysis-newsletter/checkouts/master/source/article-oscovida-intro.rst:: WARNING: document isn't included in any toctree done preparing documents... done assembling single document... issue-2020-07 writing... done writing additional files... copying images... [100%] _static/validate-run.gif copying static files... done copying extra files... done dumping object inventory... done build succeeded, 3 warnings. [rtd-command-info] start-time: 2020-07-17T10:30:15.812000Z, end-time: 2020-07-17T10:30:20.425000Z, duration: 4, exit-code: 0 python /user_builds/data-analysis-newsletter/envs/master/bin/sphinx-build -b latex -D language=en -d _build/doctrees . _build/latex Running Sphinx v1.3.5 making output directory... loading translations [en]... done loading pickled environment... not yet created building [mo]: targets for 0 po files that are out of date building [latex]: all documents updating environment: 5 added, 0 changed, 0 removed reading sources... [ 20%] article-EXtra-data-1.2 reading sources... [ 40%] article-da-docs reading sources... [ 60%] article-oscovida-intro reading sources... [ 80%] index reading sources... [100%] issue-2020-07 looking for now-outdated files... none found pickling environment... done checking consistency... /user_builds/data-analysis-newsletter/checkouts/master/source/article-EXtra-data-1.2.rst:: WARNING: document isn't included in any toctree /user_builds/data-analysis-newsletter/checkouts/master/source/article-da-docs.rst:: WARNING: document isn't included in any toctree /user_builds/data-analysis-newsletter/checkouts/master/source/article-oscovida-intro.rst:: WARNING: document isn't included in any toctree done processing DAnewsletter.tex... index issue-2020-07 resolving references... writing... done copying images... _static/validate-run.gif copying TeX support files... done build succeeded, 3 warnings. [rtd-command-info] start-time: 2020-07-17T10:30:20.490000Z, end-time: 2020-07-17T10:30:21.056000Z, duration: 0, exit-code: 0 pdflatex -interaction=nonstopmode /user_builds/data-analysis-newsletter/checkouts/master/source/_build/latex/DAnewsletter.tex This is pdfTeX, Version 3.14159265-2.6-1.40.15 (TeX Live 2015/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (/user_builds/data-analysis-newsletter/checkouts/master/source/_build/latex/DAn ewsletter.tex LaTeX2e <2014/05/01> Babel <3.9l> and hyphenation patterns for 2 languages loaded. 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(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) (/usr/share/texlive/texmf-dist/tex/latex/caption/newfloat.sty) (/usr/share/texlive/texmf-dist/tex/latex/capt-of/capt-of.sty) (/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty) (/usr/share/texlive/texmf-dist/tex/latex/eqparbox/eqparbox.sty (/usr/share/texlive/texmf-dist/tex/latex/environ/environ.sty (/usr/share/texlive/texmf-dist/tex/latex/trimspaces/trimspaces.sty))) Writing index file DAnewsletter.idx No file DAnewsletter.aux. (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmr.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd) (/usr/share/texlive/texmf-dist/tex/context/base/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) Underfull \hbox (badness 10000) in paragraph at lines 134--134 (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<><><><> [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map }] [2] Adding blank page after the table of contents. [1] [2] [1] [2] Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) ! LaTeX Error: Unknown graphics extension: .gif. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.197 \includegraphics{{validate-run}.gif} ! LaTeX Error: Unknown graphics extension: .gif. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.197 \includegraphics{{validate-run}.gif} [3] [4] No file DAnewsletter.ind. [5] (./DAnewsletter.aux) Package rerunfilecheck Warning: File `DAnewsletter.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on DAnewsletter.pdf (9 pages, 73055 bytes). Transcript written on DAnewsletter.log. [rtd-command-info] start-time: 2020-07-17T10:30:21.123000Z, end-time: 2020-07-17T10:30:21.178000Z, duration: 0, exit-code: 0 makeindex -s python.ist DAnewsletter.idx This is makeindex, version 2.15 [TeX Live 2015/dev] (kpathsea + Thai support). Scanning style file ./python.ist......done (6 attributes redefined, 0 ignored). Scanning input file DAnewsletter.idx...done (0 entries accepted, 0 rejected). Nothing written in DAnewsletter.ind. Transcript written in DAnewsletter.ilg. [rtd-command-info] start-time: 2020-07-17T10:30:21.236000Z, end-time: 2020-07-17T10:30:22.097000Z, duration: 0, exit-code: 0 pdflatex -interaction=nonstopmode /user_builds/data-analysis-newsletter/checkouts/master/source/_build/latex/DAnewsletter.tex This is pdfTeX, Version 3.14159265-2.6-1.40.15 (TeX Live 2015/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (/user_builds/data-analysis-newsletter/checkouts/master/source/_build/latex/DAn ewsletter.tex LaTeX2e <2014/05/01> Babel <3.9l> and hyphenation patterns for 2 languages loaded. 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[1] [2] [1] [2] Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) ! LaTeX Error: Unknown graphics extension: .gif. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.197 \includegraphics{{validate-run}.gif} ! LaTeX Error: Unknown graphics extension: .gif. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.197 \includegraphics{{validate-run}.gif} [3] [4] (./DAnewsletter.ind) [5] (./DAnewsletter.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on DAnewsletter.pdf (9 pages, 83748 bytes). Transcript written on DAnewsletter.log. 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