Read the Docs build information Build id: 18867 Project: extra-hed Version: latest Commit: f967518371a026cae40681eb8aa899329f59d376 Date: 2020-08-28T13:05:50.894493Z State: finished Success: False [rtd-command-info] start-time: 2020-08-28T18:05:54.679000Z, end-time: 2020-08-28T18:06:08.766000Z, duration: 14, exit-code: 0 python3 -mvirtualenv --no-site-packages --no-download /user_builds/extra-hed/envs/latest Using base prefix '/usr' New python executable in /user_builds/extra-hed/envs/latest/bin/python3 Not overwriting existing python script /user_builds/extra-hed/envs/latest/bin/python (you must use /user_builds/extra-hed/envs/latest/bin/python3) Installing setuptools, pip, wheel...done. [rtd-command-info] start-time: 2020-08-28T18:06:08.830000Z, end-time: 2020-08-28T18:06:29.708000Z, duration: 20, exit-code: 0 python /user_builds/extra-hed/envs/latest/bin/pip install --use-wheel -U --cache-dir /user_builds/extra-hed/.cache/pip sphinx==1.3.5 Pygments==2.1.3 setuptools==20.1.1 docutils==0.12 mkdocs==0.15.0 PyYAML==5.2 mock==1.0.1 pillow==2.6.1 git+https://github.com/rtfd/readthedocs-sphinx-ext.git@0.6-alpha#egg=readthedocs-sphinx-ext sphinx-rtd-theme==0.1.9 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.5.4 recommonmark==0.1.1 Requirement already up-to-date: sphinx==1.3.5 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Requirement already up-to-date: Pygments==2.1.3 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Collecting setuptools==20.1.1 Using cached https://files.pythonhosted.org/packages/e8/82/3b5455f74bf9ac0757d09c625b7741e6fc284d7519cffc3babb6c5173cf5/setuptools-20.1.1-py2.py3-none-any.whl Requirement already up-to-date: docutils==0.12 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Requirement already up-to-date: mkdocs==0.15.0 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Requirement already up-to-date: PyYAML==5.2 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Requirement already up-to-date: mock==1.0.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Requirement already up-to-date: pillow==2.6.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Collecting readthedocs-sphinx-ext from git+https://github.com/rtfd/readthedocs-sphinx-ext.git@0.6-alpha#egg=readthedocs-sphinx-ext Cloning https://github.com/rtfd/readthedocs-sphinx-ext.git (to 0.6-alpha) to /tmp/pip-build-k3nw4kpv/readthedocs-sphinx-ext Requirement already up-to-date: sphinx-rtd-theme==0.1.9 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Requirement already up-to-date: alabaster!=0.7.5,<0.8,>=0.7 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Requirement already up-to-date: commonmark==0.5.4 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Requirement already up-to-date: recommonmark==0.1.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages Requirement already up-to-date: babel!=2.0,>=1.3 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx==1.3.5) Requirement already up-to-date: six>=1.4 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx==1.3.5) Requirement already up-to-date: Jinja2>=2.3 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx==1.3.5) Requirement already up-to-date: snowballstemmer>=1.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx==1.3.5) Requirement already up-to-date: livereload>=2.3.2 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from mkdocs==0.15.0) Requirement already up-to-date: tornado>=4.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from mkdocs==0.15.0) Requirement already up-to-date: mkdocs-bootswatch>=0.1.0 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from mkdocs==0.15.0) Requirement already up-to-date: mkdocs-bootstrap>=0.1.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from mkdocs==0.15.0) Requirement already up-to-date: Markdown>=2.3.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from mkdocs==0.15.0) Requirement already up-to-date: click>=4.0 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from mkdocs==0.15.0) Requirement already up-to-date: requests in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from readthedocs-sphinx-ext) Requirement already up-to-date: nilsimsa>=0.3.7 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from readthedocs-sphinx-ext) Requirement already up-to-date: pytz>=2015.7 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from babel!=2.0,>=1.3->sphinx==1.3.5) Requirement already up-to-date: MarkupSafe>=0.23 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from Jinja2>=2.3->sphinx==1.3.5) Requirement already up-to-date: backports-abc>=0.4 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from tornado>=4.1->mkdocs==0.15.0) Requirement already up-to-date: idna<2.9,>=2.5 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from requests->readthedocs-sphinx-ext) Requirement already up-to-date: chardet<3.1.0,>=3.0.2 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from requests->readthedocs-sphinx-ext) Requirement already up-to-date: urllib3<1.25,>=1.21.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from requests->readthedocs-sphinx-ext) Requirement already up-to-date: certifi>=2017.4.17 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from requests->readthedocs-sphinx-ext) Installing collected packages: setuptools, readthedocs-sphinx-ext Found existing installation: setuptools 28.8.0 Uninstalling setuptools-28.8.0: Successfully uninstalled setuptools-28.8.0 Found existing installation: readthedocs-sphinx-ext 0.5.4 Uninstalling readthedocs-sphinx-ext-0.5.4: Successfully uninstalled readthedocs-sphinx-ext-0.5.4 Running setup.py install for readthedocs-sphinx-ext: started Running setup.py install for readthedocs-sphinx-ext: finished with status 'done' Successfully installed readthedocs-sphinx-ext-0.5.4 setuptools-20.1.1 You are using pip version 9.0.1, however version 20.2.2 is available. You should consider upgrading via the 'pip install --upgrade pip' command. [rtd-command-info] start-time: 2020-08-28T18:06:29.785000Z, end-time: 2020-08-28T18:10:41.234000Z, duration: 251, exit-code: 0 python /user_builds/extra-hed/envs/latest/bin/pip install --exists-action=w --cache-dir /user_builds/extra-hed/.cache/pip -r/user_builds/extra-hed/checkouts/latest/docs/requirements.txt Collecting git+https://git.xfel.eu/gitlab/xfel-rtd/rtd-conf.git (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 6)) Cloning https://git.xfel.eu/gitlab/xfel-rtd/rtd-conf.git to /tmp/pip-ehginguh-build Requirement already satisfied: sphinx in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 1)) Requirement already satisfied: sphinx_rtd_theme in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 2)) Collecting nbsphinx (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Using cached https://files.pythonhosted.org/packages/4e/2d/d26ca09ca7659e5bf6fa3334a5417ea3ed871b277ad6efeb6a38b8ac30a1/nbsphinx-0.7.1-py3-none-any.whl Collecting pandoc (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 4)) Downloading https://files.pythonhosted.org/packages/49/b1/d2d4b30ee81ea5cb7aee5ba3591752a637fdc49d0a42fa9683874b60b9fb/pandoc-1.0.2.tar.gz (488kB) Collecting pint (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 5)) Downloading https://files.pythonhosted.org/packages/15/9d/bf177ebbc57d25e9e296addc14a1303d1e34d7964af5df428a8332349c42/Pint-0.9-py2.py3-none-any.whl (138kB) Collecting slumber (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 7)) Downloading https://files.pythonhosted.org/packages/17/3a/6d42c6a5909207aa2487fda0c6f09c7dac259e5154d6ad74ec160db69660/slumber-0.7.1.tar.gz Collecting breathe==4.7.3 (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 8)) Downloading https://files.pythonhosted.org/packages/1c/7a/7a0f6c8367c96542d01fc1de8cedce8d93c8e3d9ded4e5b03eaefdcbcc82/breathe-4.7.3-py2.py3-none-any.whl (73kB) Collecting numpy (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 9)) Downloading https://files.pythonhosted.org/packages/b7/6f/24647f014eef9b67a24adfcbcd4f4928349b4a0f8393b3d7fe648d4d2de3/numpy-1.16.6.zip (5.1MB) Collecting matplotlib (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 10)) Downloading https://files.pythonhosted.org/packages/46/be/2c59876e9796d51a5c86c92e0161d2d47e4674211177ba15bff3b669f459/matplotlib-2.2.5-cp34-cp34m-manylinux1_x86_64.whl (12.8MB) Collecting typing (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 11)) Downloading https://files.pythonhosted.org/packages/05/d9/6eebe19d46bd05360c9a9aae822e67a80f9242aabbfc58b641b957546607/typing-3.7.4.3.tar.gz (78kB) Collecting traits==4.6.0 (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 12)) Downloading https://files.pythonhosted.org/packages/56/47/03f50e82e1ff1e8a602c5f2cf12f08675f79a7169629fe4ce521e59d265f/traits-4.6.0.tar.bz2 (354kB) Collecting lxml==3.6.4 (from -r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 13)) Downloading https://files.pythonhosted.org/packages/3a/2d/953dfc8496cc9d5add66c0fd468d786d4e4706d263285bc4bb1785485149/lxml-3.6.4-cp34-cp34m-manylinux1_x86_64.whl (4.2MB) Requirement already satisfied: Jinja2>=2.3 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 1)) Requirement already satisfied: snowballstemmer>=1.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 1)) Requirement already satisfied: docutils>=0.11 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 1)) Requirement already satisfied: six>=1.4 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 1)) Requirement already satisfied: alabaster<0.8,>=0.7 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 1)) Requirement already satisfied: Pygments>=2.0 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 1)) Requirement already satisfied: babel!=2.0,>=1.3 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from sphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 1)) Collecting traitlets (from nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/ca/ab/872a23e29cec3cf2594af7e857f18b687ad21039c1f9b922fac5b9b142d5/traitlets-4.3.3-py2.py3-none-any.whl (75kB) Collecting nbconvert!=5.4 (from nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/b8/39/1e67fea74dc9577cc49f9863fe3ec824e525d1304ab6027d95a94cd586f5/nbconvert-5.4.1-py2.py3-none-any.whl (407kB) Collecting nbformat (from nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/5d/69/87745d03d1964649ef734238b32bf08eb843a6594cb03e8bc77edc8f33e9/nbformat-5.0.3-py3-none-any.whl (169kB) Collecting ply (from pandoc->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 4)) Downloading https://files.pythonhosted.org/packages/a3/58/35da89ee790598a0700ea49b2a66594140f44dec458c07e8e3d4979137fc/ply-3.11-py2.py3-none-any.whl (49kB) Requirement already satisfied: requests in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from slumber->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 7)) Collecting kiwisolver>=1.0.1 (from matplotlib->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 10)) Downloading https://files.pythonhosted.org/packages/04/73/69c86f3c617ea80d25f4ba7af3e5ce9bad72a4d024c2e7dc94524f8cbefa/kiwisolver-1.1.0-cp34-cp34m-manylinux1_x86_64.whl (90kB) Collecting cycler>=0.10 (from matplotlib->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 10)) Downloading https://files.pythonhosted.org/packages/f7/d2/e07d3ebb2bd7af696440ce7e754c59dd546ffe1bbe732c8ab68b9c834e61/cycler-0.10.0-py2.py3-none-any.whl Collecting pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 (from matplotlib->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 10)) Downloading https://files.pythonhosted.org/packages/8a/bb/488841f56197b13700afd5658fc279a2025a39e22449b7cf29864669b15d/pyparsing-2.4.7-py2.py3-none-any.whl (67kB) Collecting python-dateutil>=2.1 (from matplotlib->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 10)) Downloading https://files.pythonhosted.org/packages/d4/70/d60450c3dd48ef87586924207ae8907090de0b306af2bce5d134d78615cb/python_dateutil-2.8.1-py2.py3-none-any.whl (227kB) Requirement already satisfied: pytz in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from matplotlib->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 10)) Requirement already satisfied: MarkupSafe>=0.23 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from Jinja2>=2.3->sphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 1)) Collecting ipython-genutils (from traitlets->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/fa/bc/9bd3b5c2b4774d5f33b2d544f1460be9df7df2fe42f352135381c347c69a/ipython_genutils-0.2.0-py2.py3-none-any.whl Collecting decorator (from traitlets->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/ed/1b/72a1821152d07cf1d8b6fce298aeb06a7eb90f4d6d41acec9861e7cc6df0/decorator-4.4.2-py2.py3-none-any.whl Collecting mistune>=0.8.1 (from nbconvert!=5.4->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/09/ec/4b43dae793655b7d8a25f76119624350b4d65eb663459eb9603d7f1f0345/mistune-0.8.4-py2.py3-none-any.whl Collecting testpath (from nbconvert!=5.4->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/1b/9e/1a170feaa54f22aeb5a5d16c9015e82234275a3c8ab630b552493f9cb8a9/testpath-0.4.4-py2.py3-none-any.whl (163kB) Collecting defusedxml (from nbconvert!=5.4->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/87/1c/17f3e3935a913dfe2a5ca85fa5ccbef366bfd82eb318b1f75dadbf0affca/defusedxml-0.5.0-py2.py3-none-any.whl Collecting bleach (from nbconvert!=5.4->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/25/48/df9eca21199b6810c811e5fff88333788489c261717ab2560f79ce58d7cd/bleach-3.1.2-py2.py3-none-any.whl (151kB) Collecting jupyter-core (from nbconvert!=5.4->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/63/0d/df2d17cdf389cea83e2efa9a4d32f7d527ba78667e0153a8e676e957b2f7/jupyter_core-4.6.3-py2.py3-none-any.whl (83kB) Collecting entrypoints>=0.2.2 (from nbconvert!=5.4->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/ac/c6/44694103f8c221443ee6b0041f69e2740d89a25641e62fb4f2ee568f2f9c/entrypoints-0.3-py2.py3-none-any.whl Collecting pandocfilters>=1.4.1 (from nbconvert!=5.4->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/4c/ea/236e2584af67bb6df960832731a6e5325fd4441de001767da328c33368ce/pandocfilters-1.4.2.tar.gz Collecting jsonschema!=2.5.0,>=2.4 (from nbformat->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/c5/8f/51e89ce52a085483359217bc72cdbf6e75ee595d5b1d4b5ade40c7e018b8/jsonschema-3.2.0-py2.py3-none-any.whl (56kB) Requirement already satisfied: certifi>=2017.4.17 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from requests->slumber->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 7)) Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from requests->slumber->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 7)) Requirement already satisfied: idna<2.9,>=2.5 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from requests->slumber->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 7)) Requirement already satisfied: urllib3<1.25,>=1.21.1 in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from requests->slumber->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 7)) Requirement already satisfied: setuptools in /user_builds/extra-hed/envs/latest/lib/python3.4/site-packages (from kiwisolver>=1.0.1->matplotlib->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 10)) Collecting webencodings (from bleach->nbconvert!=5.4->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/f4/24/2a3e3df732393fed8b3ebf2ec078f05546de641fe1b667ee316ec1dcf3b7/webencodings-0.5.1-py2.py3-none-any.whl Collecting pyrsistent>=0.14.0 (from jsonschema!=2.5.0,>=2.4->nbformat->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/9f/0d/cbca4d0bbc5671822a59f270e4ce3f2195f8a899c97d0d5abb81b191efb5/pyrsistent-0.16.0.tar.gz (108kB) Collecting attrs>=17.4.0 (from jsonschema!=2.5.0,>=2.4->nbformat->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/d6/e1/3aa3b03e7643ffd6e499b203fd2a44f79893443e8b0b520d05d3e5c638d5/attrs-20.1.0-py2.py3-none-any.whl (49kB) Collecting importlib-metadata; python_version < "3.8" (from jsonschema!=2.5.0,>=2.4->nbformat->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/5f/bb/47f6789a2433e2ae73b7d4c657082fba84945e6af754a99b5e33980ad65a/importlib_metadata-1.1.3-py2.py3-none-any.whl Collecting zipp>=0.5 (from importlib-metadata; python_version < "3.8"->jsonschema!=2.5.0,>=2.4->nbformat->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/96/0a/67556e9b7782df7118c1f49bdc494da5e5e429c93aa77965f33e81287c8c/zipp-1.2.0-py2.py3-none-any.whl Collecting pathlib2; python_version == "3.4.*" or python_version < "3" (from importlib-metadata; python_version < "3.8"->jsonschema!=2.5.0,>=2.4->nbformat->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/e9/45/9c82d3666af4ef9f221cbb954e1d77ddbb513faf552aea6df5f37f1a4859/pathlib2-2.3.5-py2.py3-none-any.whl Collecting scandir; python_version < "3.5" (from pathlib2; python_version == "3.4.*" or python_version < "3"->importlib-metadata; python_version < "3.8"->jsonschema!=2.5.0,>=2.4->nbformat->nbsphinx->-r /user_builds/extra-hed/checkouts/latest/docs/requirements.txt (line 3)) Downloading https://files.pythonhosted.org/packages/df/f5/9c052db7bd54d0cbf1bc0bb6554362bba1012d03e5888950a4f5c5dadc4e/scandir-1.10.0.tar.gz Building wheels for collected packages: pandoc, slumber, numpy, typing, traits, pandocfilters, pyrsistent, scandir Running setup.py bdist_wheel for pandoc: started Running setup.py bdist_wheel for pandoc: finished with status 'done' Stored in directory: /user_builds/extra-hed/.cache/pip/wheels/d1/e8/71/bc3242b3e8f119c62eebdb0dee519fd40ac293e4835839db7c Running setup.py bdist_wheel for slumber: started Running setup.py bdist_wheel for slumber: finished with status 'done' Stored in directory: /user_builds/extra-hed/.cache/pip/wheels/48/ae/95/28defa1956124d566c55e105d5e8ecacc63c4ad0b6e15d08bd Running setup.py bdist_wheel for numpy: started Running setup.py bdist_wheel for numpy: still running... Running setup.py bdist_wheel for numpy: finished with status 'done' Stored in directory: /user_builds/extra-hed/.cache/pip/wheels/cb/c2/c1/d99e8bf789c8dd07623af6be95e6a89984c85a05e31b8513c3 Running setup.py bdist_wheel for typing: started Running setup.py bdist_wheel for typing: finished with status 'done' Stored in directory: /user_builds/extra-hed/.cache/pip/wheels/2d/04/41/8e1836e79581989c22eebac3f4e70aaac9af07b0908da173be Running setup.py bdist_wheel for traits: started Running setup.py bdist_wheel for traits: finished with status 'done' Stored in directory: /user_builds/extra-hed/.cache/pip/wheels/f7/47/a7/7b13ce060f1c7f1d01260a0f253407f251ff2b0e8de3c20156 Running setup.py bdist_wheel for pandocfilters: started Running setup.py bdist_wheel for pandocfilters: finished with status 'done' Stored in directory: /user_builds/extra-hed/.cache/pip/wheels/39/01/56/f1b08a6275acc59e846fa4c1e1b65dbc1919f20157d9e66c20 Running setup.py bdist_wheel for pyrsistent: started Running setup.py bdist_wheel for pyrsistent: finished with status 'done' Stored in directory: /user_builds/extra-hed/.cache/pip/wheels/c2/85/ad/bc6d41e2c4b35c9fdfed48f0fcd411ffc4164e67755ddf9ebb Running setup.py bdist_wheel for scandir: started Running setup.py bdist_wheel for scandir: finished with status 'done' Stored in directory: /user_builds/extra-hed/.cache/pip/wheels/91/95/75/19c98a91239878abbc7c59970abd3b4e0438a7dd5b61778335 Successfully built pandoc slumber numpy typing traits pandocfilters pyrsistent scandir Installing collected packages: ipython-genutils, decorator, traitlets, mistune, testpath, defusedxml, webencodings, bleach, jupyter-core, pyrsistent, attrs, zipp, scandir, pathlib2, importlib-metadata, jsonschema, nbformat, entrypoints, pandocfilters, nbconvert, nbsphinx, ply, pandoc, pint, slumber, breathe, numpy, kiwisolver, cycler, pyparsing, python-dateutil, matplotlib, typing, traits, lxml, RTDConf Running setup.py install for RTDConf: started Running setup.py install for RTDConf: finished with status 'done' Successfully installed RTDConf-0.1 attrs-20.1.0 bleach-3.1.2 breathe-4.7.3 cycler-0.10.0 decorator-4.4.2 defusedxml-0.5.0 entrypoints-0.3 importlib-metadata-1.1.3 ipython-genutils-0.2.0 jsonschema-3.2.0 jupyter-core-4.6.3 kiwisolver-1.1.0 lxml-3.6.4 matplotlib-2.2.5 mistune-0.8.4 nbconvert-5.4.1 nbformat-5.0.3 nbsphinx-0.7.1 numpy-1.16.6 pandoc-1.0.2 pandocfilters-1.4.2 pathlib2-2.3.5 pint-0.9 ply-3.11 pyparsing-2.4.7 pyrsistent-0.16.0 python-dateutil-2.8.1 scandir-1.10.0 slumber-0.7.1 testpath-0.4.4 traitlets-4.3.3 traits-4.6.0 typing-3.7.4.3 webencodings-0.5.1 zipp-1.2.0 You are using pip version 9.0.1, however version 20.2.2 is available. You should consider upgrading via the 'pip install --upgrade pip' command. [rtd-command-info] start-time: 2020-08-28T18:10:41.638000Z, end-time: 2020-08-28T18:10:41.667000Z, duration: 0, exit-code: 0 cat conf.py # -*- coding: utf-8 -*- # # Configuration file for the Sphinx documentation builder. # # This file does only contain a selection of the most common options. For a # full list see the documentation: # http://www.sphinx-doc.org/en/master/config # -- Path setup -------------------------------------------------------------- # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # documentation root, use os.path.abspath to make it absolute, like shown here. # import os # import sys # sys.path.insert(0, os.path.abspath('.')) # -- Project information ----------------------------------------------------- project = 'EXtra-HED' copyright = '2020, Thomas Michelat' author = 'Thomas Michelat' # The short X.Y version #import extra_hed #version = extra_hed.__version__ version = '0.1' # The full version, including alpha/beta/rc tags #release = version release = '0.1' # -- General configuration --------------------------------------------------- # If your documentation needs a minimal Sphinx version, state it here. # # needs_sphinx = '1.0' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'sphinx.ext.autodoc', 'sphinx.ext.doctest', 'sphinx.ext.intersphinx', 'sphinx.ext.todo', 'sphinx.ext.coverage', 'sphinx.ext.mathjax', 'sphinx.ext.ifconfig', 'sphinx.ext.viewcode', 'nbsphinx', 'sphinx_rtd_theme', ] # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # The suffix(es) of source filenames. # You can specify multiple suffix as a list of string: # # source_suffix = ['.rst', '.md'] source_suffix = '.rst' # The master toctree document. master_doc = 'index' # The language for content autogenerated by Sphinx. Refer to documentation # for a list of supported languages. # # This is also used if you do content translation via gettext catalogs. # Usually you set "language" from the command line for these cases. language = None # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This pattern also affects html_static_path and html_extra_path. exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store'] # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'sphinx' on_rtd = os.environ.get('READTHEDOCS') == 'True' if on_rtd: tags.add('readthedocs') # -- Options for HTML output ------------------------------------------------- # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. # html_theme = 'sphinx_rtd_theme' # Theme options are theme-specific and customize the look and feel of a theme # further. For a list of options available for each theme, see the # documentation. # # html_theme_options = {} # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". html_static_path = ['_static'] # Custom sidebar templates, must be a dictionary that maps document names # to template names. # # The default sidebars (for documents that don't match any pattern) are # defined by theme itself. Builtin themes are using these templates by # default: ``['localtoc.html', 'relations.html', 'sourcelink.html', # 'searchbox.html']``. # # html_sidebars = {} # -- Options for HTMLHelp output --------------------------------------------- # Output file base name for HTML help builder. htmlhelp_basename = 'EXtra-HEDdoc' # -- Options for LaTeX output ------------------------------------------------ latex_elements = { # The paper size ('letterpaper' or 'a4paper'). # # 'papersize': 'letterpaper', # The font size ('10pt', '11pt' or '12pt'). # # 'pointsize': '10pt', # Additional stuff for the LaTeX preamble. # # 'preamble': '', # Latex figure (float) alignment # # 'figure_align': 'htbp', } # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ (master_doc, 'EXtra-HED.tex', 'EXtra-HED Documentation', 'Thomas Michelat', 'manual'), ] # -- Options for manual page output ------------------------------------------ # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ (master_doc, 'extra-hed', 'EXtra-HED Documentation', [author], 1) ] # -- Options for Texinfo output ---------------------------------------------- # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ (master_doc, 'EXtra-HED', 'EXtra-HED Documentation', author, 'EXtra-HED', 'One line description of project.', 'Miscellaneous'), ] # -- Options for Epub output ------------------------------------------------- # Bibliographic Dublin Core info. epub_title = project # The unique identifier of the text. This can be a ISBN number # or the project homepage. # # epub_identifier = '' # A unique identification for the text. # # epub_uid = '' # A list of files that should not be packed into the epub file. epub_exclude_files = ['search.html'] # -- Extension configuration ------------------------------------------------- # -- Options for intersphinx extension --------------------------------------- # Example configuration for intersphinx: refer to the Python standard library. intersphinx_mapping = { 'python': ('http://docs.python.org/', None), 'extra-data': ('https://extra-data.readthedocs.io/en/latest/', None) } # -- Options for todo extension ---------------------------------------------- # If true, `todo` and `todoList` produce output, else they produce nothing. todo_include_todos = False ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # import sys import os.path from six import string_types from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix else: SUFFIX = source_suffix[0] else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') html_static_path.append('/rtd_root/readthedocs/templates/sphinx/_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = False if 'html_theme' in globals(): if html_theme in ['default']: # Allow people to bail with a hack of having an html_style if not 'html_style' in globals(): import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True else: import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.org/websupport' if 'http' not in settings.MEDIA_URL: websupport2_static_url = '/static/' else: websupport2_static_url = '/media//static' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'MEDIA_URL': "/media/", 'PRODUCTION_DOMAIN': "exflrtd.desy.de", 'versions': [ ("latest", "/en/latest/"), ("stable", "/en/stable/"), ], 'downloads': [ ], 'subprojects': [ ], 'slug': 'extra-hed', 'name': u'EXtra-HED', 'rtd_language': u'en', 'canonical_url': 'http://exflrtd.desy.de/docs/extra-hed/en/latest/', 'analytics_code': '', 'single_version': False, 'conf_py_path': '/docs/', 'api_host': 'https://readthedocs.org', 'github_user': 'None', 'github_repo': 'None', 'github_version': 'master', 'display_github': False, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'master', 'display_bitbucket': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'user_analytics_code': '', 'global_analytics_code': 'UA-17997319-1', 'commit': 'f9675183', } if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): extensions.append("readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] [rtd-command-info] start-time: 2020-08-28T18:10:41.788000Z, end-time: 2020-08-28T18:10:51.159000Z, duration: 9, exit-code: 1 python /user_builds/extra-hed/envs/latest/bin/sphinx-build -T -E -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html Running Sphinx v1.3.5 making output directory... Traceback (most recent call last): File "", line 2218, in _find_and_load_unlocked AttributeError: 'module' object has no attribute '__path__' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/user_builds/extra-hed/envs/latest/lib/python3.4/site-packages/sphinx/application.py", line 431, in setup_extension mod = __import__(extension, None, None, ['setup']) File "/user_builds/extra-hed/envs/latest/lib/python3.4/site-packages/nbsphinx.py", line 47, in import sphinx.transforms.post_transforms.images ImportError: No module named 'sphinx.transforms.post_transforms'; 'sphinx.transforms' is not a package During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/user_builds/extra-hed/envs/latest/lib/python3.4/site-packages/sphinx/cmdline.py", line 243, in main opts.warningiserror, opts.tags, opts.verbosity, opts.jobs) File "/user_builds/extra-hed/envs/latest/lib/python3.4/site-packages/sphinx/application.py", line 144, in __init__ self.setup_extension(extension) File "/user_builds/extra-hed/envs/latest/lib/python3.4/site-packages/sphinx/application.py", line 435, in setup_extension err) sphinx.errors.ExtensionError: Could not import extension nbsphinx (exception: No module named 'sphinx.transforms.post_transforms'; 'sphinx.transforms' is not a package) Extension error: Could not import extension nbsphinx (exception: No module named 'sphinx.transforms.post_transforms'; 'sphinx.transforms' is not a package)