Read the Docs build information Build id: 25812 Project: test-pycalibration Version: latest Commit: af29c4b6c9a7bd5f1c0438176da50e0ba179a276 Date: 2023-03-30T07:57:15.403435Z State: finished Success: False [rtd-command-info] start-time: 2023-03-30T07:57:16.498922Z, end-time: 2023-03-30T07:57:33.707583Z, duration: 17, exit-code: 0 git clone --no-single-branch --depth 50 http://git.xfel.eu/calibration/pycalibration.git . Cloning into '.'... [rtd-command-info] start-time: 2023-03-30T07:57:34.001940Z, end-time: 2023-03-30T07:57:34.869018Z, duration: 0, exit-code: 0 git checkout --force origin/doc/mkdocs_new_documentations Note: checking out 'origin/doc/mkdocs_new_documentations'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at af29c4b6 test rtd [rtd-command-info] start-time: 2023-03-30T07:57:34.952381Z, end-time: 2023-03-30T07:57:35.012520Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2023-03-30T07:57:36.561382Z, end-time: 2023-03-30T07:57:41.399109Z, duration: 4, exit-code: 0 python3.8 -mvirtualenv /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest Using base prefix '/home/docs/.pyenv/versions/3.8.0' New python executable in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python3.8 Also creating executable in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2023-03-30T07:57:41.491915Z, end-time: 2023-03-30T07:57:42.427473Z, duration: 0, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m pip install --upgrade --no-cache-dir pip Requirement already satisfied: pip in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (23.0.1) [rtd-command-info] start-time: 2023-03-30T07:57:42.513599Z, end-time: 2023-03-30T07:58:09.867158Z, duration: 27, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m pip install --upgrade --no-cache-dir jinja2==2.11.3 markupsafe==2.0.1 Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 mkdocs<1.1 Collecting jinja2==2.11.3 Downloading Jinja2-2.11.3-py2.py3-none-any.whl (125 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 125.7/125.7 kB 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filename=Pillow-5.4.1-cp38-cp38-linux_x86_64.whl size=1262384 sha256=8a86fe6125e5c5547a930c0b60bd1b85a104a9a5cf5be719903db271023a481b Stored in directory: /tmp/pip-ephem-wheel-cache-xeo344iw/wheels/5f/a8/6b/5b7b3f764d879214eb03570f74d2b086201eb514e6ffa68d6d Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.3-py3-none-any.whl size=492022 sha256=d1555568a9563fdcdd39fd08107181d413dbe5c9725a16c67799fe475b01f728 Stored in directory: /tmp/pip-ephem-wheel-cache-xeo344iw/wheels/a0/0b/ee/e6994fadb42c1354dcccb139b0bf2795271bddfe6253ccdf11 Successfully built mock pillow future Installing collected packages: snowballstemmer, pytz, Pygments, mock, docutils, zipp, urllib3, tornado, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, six, setuptools, PyYAML, pillow, packaging, markupsafe, imagesize, idna, future, click, charset-normalizer, certifi, babel, alabaster, requests, livereload, jinja2, importlib-metadata, commonmark, sphinx, Markdown, recommonmark, mkdocs Attempting uninstall: setuptools Found existing installation: setuptools 67.6.1 Uninstalling setuptools-67.6.1: Successfully uninstalled setuptools-67.6.1 Successfully installed Markdown-3.4.3 PyYAML-6.0 Pygments-2.3.1 alabaster-0.7.13 babel-2.12.1 certifi-2022.12.7 charset-normalizer-3.1.0 click-8.1.3 commonmark-0.8.1 docutils-0.14 future-0.18.3 idna-3.4 imagesize-1.4.1 importlib-metadata-6.1.0 jinja2-2.11.3 livereload-2.6.3 markupsafe-2.0.1 mkdocs-1.0.4 mock-1.0.1 packaging-23.0 pillow-5.4.1 pytz-2023.3 recommonmark-0.5.0 requests-2.28.2 setuptools-41.0.1 six-1.16.0 snowballstemmer-2.2.0 sphinx-5.1.1 sphinxcontrib-applehelp-1.0.4 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.1 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.3 sphinxcontrib-serializinghtml-1.1.5 tornado-6.2 urllib3-1.26.15 zipp-3.15.0 [rtd-command-info] start-time: 2023-03-30T07:58:09.955526Z, end-time: 2023-03-30T07:58:24.110364Z, duration: 14, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt Collecting mkdocs==1.4.2 Downloading mkdocs-1.4.2-py3-none-any.whl (3.7 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.7/3.7 MB 30.4 MB/s eta 0:00:00 Collecting mkdocs-material==9.0.15 Downloading mkdocs_material-9.0.15-py3-none-any.whl (7.7 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.7/7.7 MB 146.6 MB/s eta 0:00:00 Collecting mkdocstrings[python]==0.19 Downloading mkdocstrings-0.19.0-py3-none-any.whl (25 kB) Collecting mkdocs-glightbox Downloading mkdocs_glightbox-0.3.2-py3-none-any.whl (28 kB) Collecting mkdocs-section-index==0.3.5 Downloading mkdocs_section_index-0.3.5-py3-none-any.whl (8.6 kB) Collecting mkdocs-literate-nav==0.5.0 Downloading mkdocs_literate_nav-0.5.0-py3-none-any.whl (12 kB) 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pkgutil_resolve_name-1.3.10-py3-none-any.whl (4.7 kB) Collecting pyzmq>=23.0 Downloading pyzmq-25.0.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (1.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.1/1.1 MB 204.3 MB/s eta 0:00:00 Requirement already satisfied: tornado>=6.2 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from jupyter-client>=6.1.12->nbclient>=0.5.0->nbconvert<8,>=7.2.9->mkdocs-jupyter==0.24.0->-r docs/requirements.txt (line 8)) (6.2) Building wheels for collected packages: mkdocs-redirects Building wheel for mkdocs-redirects (setup.py): started Building wheel for mkdocs-redirects (setup.py): finished with status 'done' Created wheel for mkdocs-redirects: filename=mkdocs_redirects-1.2.0-py3-none-any.whl size=6055 sha256=74f00b5bd55a8894c4099321c4aac0cd461e74e7a512fe226cb660967faa0cbf Stored in directory: /tmp/pip-ephem-wheel-cache-fundt89v/wheels/56/27/09/2113947d506c30867dbf5b5ab09a5434c50757a976e6ac2f1f Successfully built mkdocs-redirects Installing collected packages: webencodings, mistune, fastjsonschema, watchdog, traitlets, toml, tinycss2, soupsieve, regex, pyzmq, pyyaml-env-tag, python-dateutil, pyrsistent, pygments, platformdirs, pkgutil-resolve-name, pandocfilters, mkdocs-material-extensions, mergedeep, mdurl, jupyterlab-pygments, jinja2, importlib-resources, defusedxml, colorama, bleach, attrs, markdown-it-py, markdown, jupyter-core, jsonschema, griffe, ghp-import, beautifulsoup4, pymdown-extensions, nbformat, mkdocs-glightbox, mkdocs, mdit-py-plugins, jupyter-client, nbclient, mkdocs-section-index, mkdocs-redirects, mkdocs-material, mkdocs-literate-nav, mkdocs-gen-files, mkdocs-autorefs, jupytext, nbconvert, mkdocstrings, mkdocstrings-python, mkdocs-jupyter Attempting uninstall: pygments Found existing installation: Pygments 2.3.1 Uninstalling Pygments-2.3.1: Successfully uninstalled Pygments-2.3.1 Attempting uninstall: jinja2 Found existing installation: Jinja2 2.11.3 Uninstalling Jinja2-2.11.3: Successfully uninstalled Jinja2-2.11.3 Attempting uninstall: markdown Found existing installation: Markdown 3.4.3 Uninstalling Markdown-3.4.3: Successfully uninstalled Markdown-3.4.3 Attempting uninstall: mkdocs Found existing installation: mkdocs 1.0.4 Uninstalling mkdocs-1.0.4: Successfully uninstalled mkdocs-1.0.4 Successfully installed attrs-22.2.0 beautifulsoup4-4.12.0 bleach-6.0.0 colorama-0.4.6 defusedxml-0.7.1 fastjsonschema-2.16.3 ghp-import-2.1.0 griffe-0.25.5 importlib-resources-5.12.0 jinja2-3.1.2 jsonschema-4.17.3 jupyter-client-8.1.0 jupyter-core-5.3.0 jupyterlab-pygments-0.2.2 jupytext-1.14.5 markdown-3.3.7 markdown-it-py-2.2.0 mdit-py-plugins-0.3.5 mdurl-0.1.2 mergedeep-1.3.4 mistune-2.0.5 mkdocs-1.4.2 mkdocs-autorefs-0.4.1 mkdocs-gen-files-0.4.0 mkdocs-glightbox-0.3.2 mkdocs-jupyter-0.24.0 mkdocs-literate-nav-0.5.0 mkdocs-material-9.0.15 mkdocs-material-extensions-1.1.1 mkdocs-redirects-1.2.0 mkdocs-section-index-0.3.5 mkdocstrings-0.19.0 mkdocstrings-python-0.8.3 nbclient-0.7.2 nbconvert-7.2.10 nbformat-5.8.0 pandocfilters-1.5.0 pkgutil-resolve-name-1.3.10 platformdirs-3.2.0 pygments-2.14.0 pymdown-extensions-9.10 pyrsistent-0.19.3 python-dateutil-2.8.2 pyyaml-env-tag-0.1 pyzmq-25.0.2 regex-2023.3.23 soupsieve-2.4 tinycss2-1.2.1 toml-0.10.2 traitlets-5.9.0 watchdog-3.0.0 webencodings-0.5.1 [rtd-command-info] start-time: 2023-03-30T07:58:24.200697Z, end-time: 2023-03-30T07:59:26.512809Z, duration: 62, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m pip install --upgrade --upgrade-strategy eager --no-cache-dir . Processing /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/checkouts/latest Installing build dependencies: started Installing build dependencies: finished with status 'done' Getting requirements to build wheel: started Getting requirements to build wheel: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Collecting matplotlib==3.4.2 Downloading matplotlib-3.4.2-cp38-cp38-manylinux1_x86_64.whl (10.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.3/10.3 MB 73.3 MB/s eta 0:00:00 Collecting traitlets==4.3.3 Downloading traitlets-4.3.3-py2.py3-none-any.whl (75 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 75.7/75.7 kB 171.4 MB/s eta 0:00:00 Collecting docutils==0.17.1 Downloading docutils-0.17.1-py2.py3-none-any.whl (575 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 575.5/575.5 kB 210.1 MB/s eta 0:00:00 Requirement already satisfied: markupsafe==2.0.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from European-XFEL-Offline-Calibration==1.0) (2.0.1) Collecting astcheck==0.3.0 Downloading astcheck-0.3.0-py3-none-any.whl (4.9 kB) Collecting nbformat==5.0.7 Downloading nbformat-5.0.7-py3-none-any.whl (170 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 170.6/170.6 kB 202.2 MB/s eta 0:00:00 Collecting extra-data==1.12.0 Downloading EXtra_data-1.12.0-py3-none-any.whl (133 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 133.2/133.2 kB 185.4 MB/s eta 0:00:00 Collecting notebook==6.1.5 Downloading notebook-6.1.5-py3-none-any.whl (9.5 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 9.5/9.5 MB 150.0 MB/s eta 0:00:00 Collecting lxml==4.5.0 Downloading lxml-4.5.0-cp38-cp38-manylinux1_x86_64.whl (5.6 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 5.6/5.6 MB 153.6 MB/s eta 0:00:00 Collecting dynaconf==3.1.4 Downloading dynaconf-3.1.4-py2.py3-none-any.whl (197 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 197.5/197.5 kB 211.4 MB/s eta 0:00:00 Collecting sphinx==1.8.5 Downloading Sphinx-1.8.5-py2.py3-none-any.whl (3.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.1/3.1 MB 187.0 MB/s eta 0:00:00 Collecting Jinja2==2.11.2 Downloading Jinja2-2.11.2-py2.py3-none-any.whl (125 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 125.8/125.8 kB 207.3 MB/s eta 0:00:00 Collecting kafka-python==2.0.2 Downloading kafka_python-2.0.2-py2.py3-none-any.whl (246 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 246.5/246.5 kB 199.8 MB/s eta 0:00:00 Collecting env-cache==0.1 Downloading env_cache-0.1-py2.py3-none-any.whl (4.7 kB) Collecting extra-geom==1.8.0 Downloading EXtra_geom-1.8.0-py3-none-any.whl (83 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 83.3/83.3 kB 171.8 MB/s eta 0:00:00 Collecting jupyter-console==6.1.0 Downloading jupyter_console-6.1.0-py2.py3-none-any.whl (21 kB) Collecting pasha==0.1.1 Downloading pasha-0.1.1-py3-none-any.whl (11 kB) Collecting xarray==2022.3.0 Downloading xarray-2022.3.0-py3-none-any.whl (870 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 870.9/870.9 kB 219.0 MB/s eta 0:00:00 Requirement already satisfied: python-dateutil==2.8.2 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from European-XFEL-Offline-Calibration==1.0) (2.8.2) Collecting scipy==1.7.0 Downloading scipy-1.7.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (28.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 28.4/28.4 MB 138.8 MB/s eta 0:00:00 Collecting nbparameterise==0.6 Downloading nbparameterise-0.6-py3-none-any.whl (7.7 kB) Collecting h5py==3.5.0 Downloading h5py-3.5.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (4.5 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.5/4.5 MB 167.7 MB/s eta 0:00:00 Collecting cfelpyutils==2.0.6 Downloading cfelpyutils-2.0.6-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (511 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 511.2/511.2 kB 224.8 MB/s eta 0:00:00 Collecting nbconvert==5.6.1 Downloading nbconvert-5.6.1-py2.py3-none-any.whl (455 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 455.1/455.1 kB 214.1 MB/s eta 0:00:00 Collecting princess==0.5 Downloading princess-0.5-py3-none-any.whl (4.2 kB) Collecting sharedmem==0.3.8 Downloading sharedmem-0.3.8.tar.gz (17 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting ipyparallel==6.2.4 Downloading ipyparallel-6.2.4-py2.py3-none-any.whl (198 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 198.6/198.6 kB 207.7 MB/s eta 0:00:00 Collecting requests==2.22.0 Downloading requests-2.22.0-py2.py3-none-any.whl (57 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 58.0/58.0 kB 172.2 MB/s eta 0:00:00 Collecting ipython==7.12.0 Downloading ipython-7.12.0-py3-none-any.whl (777 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 777.3/777.3 kB 217.4 MB/s eta 0:00:00 Collecting EXtra-redu==0.0.7 Downloading EXtra_redu-0.0.7-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (460 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 460.9/460.9 kB 215.1 MB/s eta 0:00:00 Collecting dill==0.3.0 Downloading dill-0.3.0.tar.gz (151 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 151.4/151.4 kB 203.5 MB/s eta 0:00:00 Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting pypandoc==1.4 Downloading pypandoc-1.4.tar.gz (27 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting prettytable==0.7.2 Downloading prettytable-0.7.2.zip (28 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting iminuit==1.3.8 Downloading iminuit-1.3.8-cp38-cp38-manylinux2010_x86_64.whl (4.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.3/4.3 MB 174.0 MB/s eta 0:00:00 Collecting calibration-client==11.2.0 Downloading calibration_client-11.2.0-py3-none-any.whl (80 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 80.4/80.4 kB 158.0 MB/s eta 0:00:00 Collecting ipython-genutils==0.2.0 Downloading ipython_genutils-0.2.0-py2.py3-none-any.whl (26 kB) Collecting Cython==0.29.21 Downloading Cython-0.29.21-cp38-cp38-manylinux1_x86_64.whl (1.9 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.9/1.9 MB 205.4 MB/s eta 0:00:00 Collecting tabulate==0.8.6 Downloading tabulate-0.8.6.tar.gz (45 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 45.5/45.5 kB 176.5 MB/s eta 0:00:00 Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting numpy==1.20.3 Downloading numpy-1.20.3-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (15.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 15.4/15.4 MB 92.3 MB/s eta 0:00:00 Collecting nbclient==0.5.1 Downloading nbclient-0.5.1-py3-none-any.whl (65 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 65.7/65.7 kB 155.4 MB/s eta 0:00:00 Collecting pyyaml==5.3 Downloading PyYAML-5.3.tar.gz (268 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 268.2/268.2 kB 220.3 MB/s eta 0:00:00 Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting scikit-learn==0.22.2.post1 Downloading scikit_learn-0.22.2.post1-cp38-cp38-manylinux1_x86_64.whl (7.0 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.0/7.0 MB 152.4 MB/s eta 0:00:00 Collecting pyzmq==23.2.0 Downloading pyzmq-23.2.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (1.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.1/1.1 MB 205.0 MB/s eta 0:00:00 Collecting jupyter-client==7.3.4 Downloading jupyter_client-7.3.4-py3-none-any.whl (132 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 132.1/132.1 kB 209.6 MB/s eta 0:00:00 Collecting jupyter-core==4.10.0 Downloading jupyter_core-4.10.0-py3-none-any.whl (87 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 87.3/87.3 kB 160.3 MB/s eta 0:00:00 Collecting gitpython==3.1.0 Downloading GitPython-3.1.0-py3-none-any.whl (450 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 450.7/450.7 kB 163.7 MB/s eta 0:00:00 Collecting metadata-client==3.0.8 Downloading metadata_client-3.0.8-py3-none-any.whl (109 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 109.9/109.9 kB 208.2 MB/s eta 0:00:00 Collecting ipykernel==5.1.4 Downloading ipykernel-5.1.4-py3-none-any.whl (116 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 116.8/116.8 kB 182.4 MB/s eta 0:00:00 Collecting requests-oauthlib Downloading requests_oauthlib-1.3.1-py2.py3-none-any.whl (23 kB) Collecting oauth2-xfel-client>=6.1 Downloading oauth2_xfel_client-6.1.1-py3-none-any.whl (9.8 kB) Collecting oauthlib Downloading oauthlib-3.2.2-py3-none-any.whl (151 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 151.7/151.7 kB 213.3 MB/s eta 0:00:00 Requirement already satisfied: pytz in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from calibration-client==11.2.0->European-XFEL-Offline-Calibration==1.0) (2023.3) Collecting mypy-extensions>=0.4.3 Downloading mypy_extensions-1.0.0-py3-none-any.whl (4.7 kB) Collecting pandas>=1.1.5 Downloading pandas-1.5.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (12.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 12.2/12.2 MB 146.0 MB/s eta 0:00:00 Collecting euxfel-bunch-pattern>=0.6 Downloading euxfel_bunch_pattern-0.6-py3-none-any.whl (5.3 kB) Collecting gitdb<5,>=4.0.1 Downloading gitdb-4.0.10-py3-none-any.whl (62 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 62.7/62.7 kB 165.4 MB/s eta 0:00:00 Requirement already satisfied: tornado>=4.2 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from ipykernel==5.1.4->European-XFEL-Offline-Calibration==1.0) (6.2) Collecting decorator Downloading decorator-5.1.1-py3-none-any.whl (9.1 kB) Requirement already satisfied: setuptools>=18.5 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (41.0.1) Collecting setuptools>=18.5 Downloading setuptools-67.6.1-py3-none-any.whl (1.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.1/1.1 MB 218.6 MB/s eta 0:00:00 Collecting backcall Downloading backcall-0.2.0-py2.py3-none-any.whl (11 kB) Collecting pexpect Downloading pexpect-4.8.0-py2.py3-none-any.whl (59 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 59.0/59.0 kB 185.3 MB/s eta 0:00:00 Collecting jedi>=0.10 Downloading jedi-0.18.2-py2.py3-none-any.whl (1.6 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.6/1.6 MB 208.1 MB/s eta 0:00:00 Collecting pickleshare Downloading pickleshare-0.7.5-py2.py3-none-any.whl (6.9 kB) Requirement already satisfied: pygments in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (2.14.0) Collecting prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 Downloading prompt_toolkit-3.0.38-py3-none-any.whl (385 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 385.8/385.8 kB 215.2 MB/s eta 0:00:00 Collecting entrypoints Downloading entrypoints-0.4-py3-none-any.whl (5.3 kB) Collecting nest-asyncio>=1.5.4 Downloading nest_asyncio-1.5.6-py3-none-any.whl (5.2 kB) Collecting kiwisolver>=1.0.1 Downloading kiwisolver-1.4.4-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (1.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 217.4 MB/s eta 0:00:00 Collecting cycler>=0.10 Downloading cycler-0.11.0-py3-none-any.whl (6.4 kB) Collecting pyparsing>=2.2.1 Downloading pyparsing-3.0.9-py3-none-any.whl (98 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 98.3/98.3 kB 165.0 MB/s eta 0:00:00 Collecting pillow>=6.2.0 Downloading Pillow-9.4.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (3.3 MB) 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Collecting mistune<2,>=0.8.1 Downloading mistune-0.8.4-py2.py3-none-any.whl (16 kB) Requirement already satisfied: jsonschema!=2.5.0,>=2.4 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (4.17.3) Collecting prometheus-client Downloading prometheus_client-0.16.0-py3-none-any.whl (122 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 122.5/122.5 kB 190.9 MB/s eta 0:00:00 Collecting terminado>=0.8.3 Downloading terminado-0.17.1-py3-none-any.whl (17 kB) Collecting Send2Trash Downloading Send2Trash-1.8.0-py3-none-any.whl (18 kB) Collecting argon2-cffi Downloading argon2_cffi-21.3.0-py3-none-any.whl (14 kB) Requirement already satisfied: pip>=8.1.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from pypandoc==1.4->European-XFEL-Offline-Calibration==1.0) (23.0.1) Requirement already satisfied: wheel>=0.25.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from pypandoc==1.4->European-XFEL-Offline-Calibration==1.0) (0.40.0) Requirement already satisfied: six>=1.5 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from python-dateutil==2.8.2->European-XFEL-Offline-Calibration==1.0) (1.16.0) Collecting chardet<3.1.0,>=3.0.2 Downloading chardet-3.0.4-py2.py3-none-any.whl (133 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 133.4/133.4 kB 194.2 MB/s eta 0:00:00 Requirement already satisfied: certifi>=2017.4.17 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from requests==2.22.0->European-XFEL-Offline-Calibration==1.0) (2022.12.7) Collecting idna<2.9,>=2.5 Downloading idna-2.8-py2.py3-none-any.whl (58 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 58.6/58.6 kB 154.0 MB/s eta 0:00:00 Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 Downloading urllib3-1.25.11-py2.py3-none-any.whl (127 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 128.0/128.0 kB 209.4 MB/s eta 0:00:00 Collecting joblib>=0.11 Downloading joblib-1.2.0-py3-none-any.whl (297 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 298.0/298.0 kB 204.7 MB/s eta 0:00:00 Collecting sphinxcontrib-websupport Downloading sphinxcontrib_websupport-1.2.4-py2.py3-none-any.whl (39 kB) Requirement already satisfied: babel!=2.0,>=1.3 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (2.12.1) Requirement already satisfied: packaging in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (23.0) Requirement already satisfied: alabaster<0.8,>=0.7 in 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Collecting wcwidth Downloading wcwidth-0.2.6-py2.py3-none-any.whl (29 kB) Collecting ptyprocess Downloading ptyprocess-0.7.0-py2.py3-none-any.whl (13 kB) Collecting argon2-cffi-bindings Downloading argon2_cffi_bindings-21.2.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (86 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 86.2/86.2 kB 164.3 MB/s eta 0:00:00 Requirement already satisfied: webencodings in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from bleach->nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) (0.5.1) Requirement already satisfied: sphinxcontrib-serializinghtml in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from sphinxcontrib-websupport->sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (1.1.5) Requirement already satisfied: zipp>=3.1.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from importlib-resources>=1.4.0->jsonschema!=2.5.0,>=2.4->nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (3.15.0) Collecting cffi>=1.0.1 Downloading cffi-1.15.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (442 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 442.7/442.7 kB 214.3 MB/s eta 0:00:00 Collecting pycparser Downloading pycparser-2.21-py2.py3-none-any.whl (118 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 118.7/118.7 kB 182.8 MB/s eta 0:00:00 Building wheels for collected packages: European-XFEL-Offline-Calibration, dill, prettytable, pypandoc, pyyaml, sharedmem, tabulate Building wheel for European-XFEL-Offline-Calibration (pyproject.toml): started Building wheel for European-XFEL-Offline-Calibration (pyproject.toml): finished with status 'done' Created wheel for European-XFEL-Offline-Calibration: filename=European_XFEL_Offline_Calibration-1.0-cp38-cp38-linux_x86_64.whl size=1598671 sha256=1035c35b3b982c8e81c453984cd2ed459cb3201cadcb0fefcda72a1a371f1793 Stored in directory: /tmp/pip-ephem-wheel-cache-lixlpsw3/wheels/72/93/0a/52bfcaf2aa78260765507f5ca61897968faedf7c76a31dba2d Building wheel for dill (setup.py): started Building wheel for dill (setup.py): finished with status 'done' Created wheel for dill: filename=dill-0.3.0-py3-none-any.whl size=77512 sha256=9ae70bde95f4c2a0d06f4ba0873172dce7449628cf5349170465ce444c8fc2f1 Stored in directory: /tmp/pip-ephem-wheel-cache-lixlpsw3/wheels/ec/e7/fb/9b59e2dbda9eeefab51f7cb41df434ff463c4afe1985abff24 Building wheel for prettytable (setup.py): started Building wheel for prettytable (setup.py): finished with status 'done' Created wheel for prettytable: filename=prettytable-0.7.2-py3-none-any.whl size=13699 sha256=09f8c910f13ad3ac1820e3044774c68982a473531d787a8c88212d2b426af98d Stored in directory: /tmp/pip-ephem-wheel-cache-lixlpsw3/wheels/48/6d/77/9517cb933af254f51a446f1a5ec9c2be3e45f17384940bce68 Building wheel for pypandoc (setup.py): started Building wheel for pypandoc (setup.py): finished with status 'done' Created wheel for pypandoc: filename=pypandoc-1.4-py3-none-any.whl size=16716 sha256=3f0550f9e3719a83008362016b56ebd016ba3f7dca0e8c5bb7bbf68f9082c34b Stored in directory: /tmp/pip-ephem-wheel-cache-lixlpsw3/wheels/f7/d9/a0/ef1fe56c058e41d6271a4935caaeae89d43e2280504690a329 Building wheel for pyyaml (setup.py): started Building wheel for pyyaml (setup.py): finished with status 'done' Created wheel for pyyaml: filename=PyYAML-5.3-cp38-cp38-linux_x86_64.whl size=44227 sha256=e88a874dc51dec27cf905c2c16d527545cb84e9fdd16326865ae973a4f517ccc Stored in directory: /tmp/pip-ephem-wheel-cache-lixlpsw3/wheels/e4/94/ec/65e430f66fda7a86c08f61ce59455581adc269a65881b4ffeb Building wheel for sharedmem (setup.py): started Building wheel for sharedmem (setup.py): finished with status 'done' Created wheel for sharedmem: filename=sharedmem-0.3.8-py3-none-any.whl size=18342 sha256=45e474391ff689713c7338590917dba358e14d1c69c5066dc5d6818f02d2d942 Stored in directory: /tmp/pip-ephem-wheel-cache-lixlpsw3/wheels/ee/ef/25/9562dc56f11d2b55824c1b1547eff68b75f1a0117d3b0867dd Building wheel for tabulate (setup.py): started Building wheel for tabulate (setup.py): finished with status 'done' Created wheel for tabulate: filename=tabulate-0.8.6-py3-none-any.whl size=23273 sha256=bc41a42155fc9697a483354bc883fcadfa03b0c07a1a76f89b30fff1d2761898 Stored in directory: /tmp/pip-ephem-wheel-cache-lixlpsw3/wheels/86/8c/d9/3b6c2f55efaefe656c52b725d2fdc5669085c83444979db8b3 Successfully built European-XFEL-Offline-Calibration dill prettytable pypandoc pyyaml sharedmem tabulate Installing collected packages: wcwidth, tabulate, Send2Trash, ptyprocess, prettytable, pickleshare, mistune, kafka-python, ipython-genutils, env-cache, dynaconf, chardet, backcall, urllib3, testpath, terminado, sphinxcontrib-websupport, smmap, setuptools, pyzmq, pyyaml, pyparsing, pycparser, prompt-toolkit, prometheus-client, pillow, pexpect, parso, oauthlib, numpy, nest-asyncio, mypy-extensions, lxml, kiwisolver, joblib, Jinja2, idna, entrypoints, docutils, dill, decorator, Cython, cycler, async-generator, astcheck, traitlets, sharedmem, scipy, requests, pypandoc, pasha, pandas, matplotlib, jedi, iminuit, h5py, gitdb, euxfel-bunch-pattern, cffi, xarray, sphinx, scikit-learn, requests-oauthlib, jupyter-core, ipython, gitpython, cfelpyutils, argon2-cffi-bindings, oauth2-xfel-client, nbformat, jupyter-client, extra-geom, extra-data, argon2-cffi, nbconvert, nbclient, metadata-client, ipykernel, EXtra-redu, calibration-client, princess, notebook, nbparameterise, jupyter-console, ipyparallel, European-XFEL-Offline-Calibration Attempting uninstall: mistune Found existing installation: mistune 2.0.5 Uninstalling mistune-2.0.5: Successfully uninstalled mistune-2.0.5 Attempting uninstall: urllib3 Found existing installation: urllib3 1.26.15 Uninstalling urllib3-1.26.15: Successfully uninstalled urllib3-1.26.15 Attempting uninstall: setuptools Found existing installation: setuptools 41.0.1 Uninstalling setuptools-41.0.1: Successfully uninstalled setuptools-41.0.1 Attempting uninstall: pyzmq Found existing installation: pyzmq 25.0.2 Uninstalling pyzmq-25.0.2: Successfully uninstalled pyzmq-25.0.2 Attempting uninstall: pyyaml Found existing installation: PyYAML 6.0 Uninstalling PyYAML-6.0: Successfully uninstalled PyYAML-6.0 Attempting uninstall: pillow Found existing installation: Pillow 5.4.1 Uninstalling Pillow-5.4.1: Successfully uninstalled Pillow-5.4.1 Attempting uninstall: Jinja2 Found existing installation: Jinja2 3.1.2 Uninstalling Jinja2-3.1.2: Successfully uninstalled Jinja2-3.1.2 Attempting uninstall: idna Found existing installation: idna 3.4 Uninstalling idna-3.4: Successfully uninstalled idna-3.4 Attempting uninstall: docutils Found existing installation: docutils 0.14 Uninstalling docutils-0.14: Successfully uninstalled docutils-0.14 Attempting uninstall: traitlets Found existing installation: traitlets 5.9.0 Uninstalling traitlets-5.9.0: Successfully uninstalled traitlets-5.9.0 Attempting uninstall: requests Found existing installation: requests 2.28.2 Uninstalling requests-2.28.2: Successfully uninstalled requests-2.28.2 Attempting uninstall: sphinx Found existing installation: Sphinx 5.1.1 Uninstalling Sphinx-5.1.1: Successfully uninstalled Sphinx-5.1.1 Attempting uninstall: jupyter-core Found existing installation: jupyter_core 5.3.0 Uninstalling jupyter_core-5.3.0: Successfully uninstalled jupyter_core-5.3.0 Attempting uninstall: nbformat Found existing installation: nbformat 5.8.0 Uninstalling nbformat-5.8.0: Successfully uninstalled nbformat-5.8.0 Attempting uninstall: jupyter-client Found existing installation: jupyter_client 8.1.0 Uninstalling jupyter_client-8.1.0: Successfully uninstalled jupyter_client-8.1.0 Attempting uninstall: nbconvert Found existing installation: nbconvert 7.2.10 Uninstalling nbconvert-7.2.10: Successfully uninstalled nbconvert-7.2.10 Attempting uninstall: nbclient Found existing installation: nbclient 0.7.2 Uninstalling nbclient-0.7.2: Successfully uninstalled nbclient-0.7.2 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. mkdocs-material 9.0.15 requires jinja2>=3.0, but you have jinja2 2.11.2 which is incompatible. mkdocs-material 9.0.15 requires requests>=2.26, but you have requests 2.22.0 which is incompatible. mkdocs-jupyter 0.24.0 requires nbconvert<8,>=7.2.9, but you have nbconvert 5.6.1 which is incompatible. Successfully installed Cython-0.29.21 EXtra-redu-0.0.7 European-XFEL-Offline-Calibration-1.0 Jinja2-2.11.2 Send2Trash-1.8.0 argon2-cffi-21.3.0 argon2-cffi-bindings-21.2.0 astcheck-0.3.0 async-generator-1.10 backcall-0.2.0 calibration-client-11.2.0 cfelpyutils-2.0.6 cffi-1.15.1 chardet-3.0.4 cycler-0.11.0 decorator-5.1.1 dill-0.3.0 docutils-0.17.1 dynaconf-3.1.4 entrypoints-0.4 env-cache-0.1 euxfel-bunch-pattern-0.6 extra-data-1.12.0 extra-geom-1.8.0 gitdb-4.0.10 gitpython-3.1.0 h5py-3.5.0 idna-2.8 iminuit-1.3.8 ipykernel-5.1.4 ipyparallel-6.2.4 ipython-7.12.0 ipython-genutils-0.2.0 jedi-0.18.2 joblib-1.2.0 jupyter-client-7.3.4 jupyter-console-6.1.0 jupyter-core-4.10.0 kafka-python-2.0.2 kiwisolver-1.4.4 lxml-4.5.0 matplotlib-3.4.2 metadata-client-3.0.8 mistune-0.8.4 mypy-extensions-1.0.0 nbclient-0.5.1 nbconvert-5.6.1 nbformat-5.0.7 nbparameterise-0.6 nest-asyncio-1.5.6 notebook-6.1.5 numpy-1.20.3 oauth2-xfel-client-6.1.1 oauthlib-3.2.2 pandas-1.5.3 parso-0.8.3 pasha-0.1.1 pexpect-4.8.0 pickleshare-0.7.5 pillow-9.4.0 prettytable-0.7.2 princess-0.5 prometheus-client-0.16.0 prompt-toolkit-3.0.38 ptyprocess-0.7.0 pycparser-2.21 pypandoc-1.4 pyparsing-3.0.9 pyyaml-5.3 pyzmq-23.2.0 requests-2.22.0 requests-oauthlib-1.3.1 scikit-learn-0.22.2.post1 scipy-1.7.0 setuptools-67.6.1 sharedmem-0.3.8 smmap-5.0.0 sphinx-1.8.5 sphinxcontrib-websupport-1.2.4 tabulate-0.8.6 terminado-0.17.1 testpath-0.6.0 traitlets-4.3.3 urllib3-1.25.11 wcwidth-0.2.6 xarray-2022.3.0 [rtd-command-info] start-time: 2023-03-30T07:59:26.744692Z, end-time: 2023-03-30T07:59:26.807208Z, duration: 0, exit-code: 0 cat mkdocs.yml copyright: '© 2018 European XFEL' docs_dir: /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/checkouts/latest/docs extra_css: - css/custom.css - http://rtd.xfel.eu/static/css/badge_only.css - http://rtd.xfel.eu/static/css/readthedocs-doc-embed.css extra_javascript: - readthedocs-data.js - http://rtd.xfel.eu/static/core/js/readthedocs-doc-embed.js - http://rtd.xfel.eu/static/javascript/readthedocs-analytics.js google_analytics: null markdown_extensions: - pymdownx.highlight: anchor_linenums: true - pymdownx.inlinehilite - pymdownx.snippets - pymdownx.tasklist - pymdownx.arithmatex: generic: true - pymdownx.tabbed: null - pymdownx.details - pymdownx.mark - pymdownx.emoji: null - attr_list - def_list - footnotes - md_in_html - toc: permalink: true - admonition - tables - codehilite nav: - index.md - Operation: - Available Calibration notebooks: operation/available_notebooks.md - CALCAT: operation/calibration_database.md - myMDC: operation/myMDC.md - Calibration webservice: operation/webservice.md - Troubleshooting: - Correcting detector RAW data: operation/troubleshooting_correction.md - Calibration constant generation: operation/troubleshooting_calibration_generation.md - Development: - Installation: development/installation.md - Workflow: development/workflow.md - How to write a notebook: development/how_to_write_xfel_calibrate_notebook_NBC.ipynb - Configuration: development/configuration.md - Advanced topics: development/advanced.md - Code Reference: reference/ - Reference: - FAQ: references/faq.md - Changelog: references/changelog.md - Glossary: references/glossary.md plugins: - glightbox - literate-nav: nav_file: SUMMARY.md - mkdocstrings: handlers: python: docstring_section_style: list docstring_style: sphinx import: - https://docs.python-requests.org/en/master/objects.inv synatx: sphinx - search - autorefs - mkdocs-jupyter: allow_errors: false include: - '*.ipynb' repo_url: https://git.xfel.eu/calibration/pycalibration site_name: EuXFEL Offline calibration theme: features: - navigation.tabs - navigation.sections - navigation.top - search.suggest - search.highlight - content.tabs.link - content.code.annotation - content.code.copy - navigation.indexes language: en name: material palette: - scheme: light toggle: icon: material/lightbulb name: Switch to dark mode - scheme: slate toggle: icon: material/lightbulb-outline name: Switch to light mode [rtd-command-info] start-time: 2023-03-30T07:59:26.895853Z, end-time: 2023-03-30T07:59:28.435649Z, duration: 1, exit-code: 1 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m mkdocs build --clean --site-dir _build/html --config-file mkdocs.yml INFO - Cleaning site directory INFO - Building documentation to directory: /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/checkouts/latest/_build/html INFO - The following pages exist in the docs directory, but are not included in the "nav" configuration: - operation.md - overview.md WARNING - A relative path to 'reference' is included in the 'nav' configuration, which is not found in the documentation files INFO - Converting notebook (execute=False): /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/checkouts/latest/docs/development/how_to_write_xfel_calibrate_notebook_NBC.ipynb ERROR - Error reading page 'development/how_to_write_xfel_calibrate_notebook_NBC.ipynb': mkdocs_html/notebook.html.j2 Traceback (most recent call last): File "/home/docs/.pyenv/versions/3.8.0/lib/python3.8/runpy.py", line 192, in _run_module_as_main return _run_code(code, main_globals, None, File "/home/docs/.pyenv/versions/3.8.0/lib/python3.8/runpy.py", line 85, in _run_code exec(code, run_globals) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/mkdocs/__main__.py", line 301, in cli() File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/click/core.py", line 1130, in __call__ return self.main(*args, **kwargs) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/click/core.py", line 1055, in main rv = self.invoke(ctx) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/click/core.py", line 1657, in invoke return _process_result(sub_ctx.command.invoke(sub_ctx)) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/click/core.py", line 1404, in invoke return ctx.invoke(self.callback, **ctx.params) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/click/core.py", line 760, in invoke return __callback(*args, **kwargs) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/mkdocs/__main__.py", line 250, in build_command build.build(cfg, dirty=not clean) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/mkdocs/commands/build.py", line 308, in build _populate_page(file.page, config, files, dirty) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/mkdocs/commands/build.py", line 181, in _populate_page page.render(config, files) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/mkdocs_jupyter/plugin.py", line 108, in new_render body = convert.nb2html( File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/mkdocs_jupyter/nbconvert2.py", line 148, in nb2html content, resources = exporter.from_filename( File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/nbconvert/exporters/exporter.py", line 179, in from_filename return self.from_file(f, resources=resources, **kw) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/nbconvert/exporters/exporter.py", line 197, in from_file return self.from_notebook_node(nbformat.read(file_stream, as_version=4), resources=resources, **kw) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/nbconvert/exporters/html.py", line 95, in from_notebook_node return super(HTMLExporter, self).from_notebook_node(nb, resources, **kw) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/nbconvert/exporters/templateexporter.py", line 322, in from_notebook_node output = self.template.render(nb=nb_copy, resources=resources) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/nbconvert/exporters/templateexporter.py", line 114, in template self._template_cached = self._load_template() File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/nbconvert/exporters/templateexporter.py", line 293, in _load_template return self.environment.get_template(template_file) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/jinja2/environment.py", line 883, in get_template return self._load_template(name, self.make_globals(globals)) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/jinja2/environment.py", line 857, in _load_template template = self.loader.load(self, name, globals) File "/usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages/jinja2/loaders.py", line 429, in load raise TemplateNotFound(name) jinja2.exceptions.TemplateNotFound: mkdocs_html/notebook.html.j2