Read the Docs build information Build id: 25867 Project: test-pycalibration Version: latest Commit: 5517943828f13cff5a566916b2ae0903e67c27fd Date: 2023-03-30T17:02:36.402885Z State: finished Success: True [rtd-command-info] start-time: 2023-03-30T17:02:37.596162Z, end-time: 2023-03-30T17:02:54.605462Z, duration: 17, exit-code: 0 git clone --no-single-branch --depth 50 http://git.xfel.eu/calibration/pycalibration.git . Cloning into '.'... [rtd-command-info] start-time: 2023-03-30T17:02:54.900441Z, end-time: 2023-03-30T17:02:55.691968Z, duration: 0, exit-code: 0 git checkout --force origin/doc/mkdocs_new_documentations Note: checking out 'origin/doc/mkdocs_new_documentations'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 55179438 test rtd [rtd-command-info] start-time: 2023-03-30T17:02:55.776860Z, end-time: 2023-03-30T17:02:55.837923Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2023-03-30T17:02:57.366121Z, end-time: 2023-03-30T17:03:02.224051Z, duration: 4, exit-code: 0 python3.8 -mvirtualenv /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest Using base prefix '/home/docs/.pyenv/versions/3.8.0' New python executable in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python3.8 Also creating executable in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2023-03-30T17:03:02.315409Z, end-time: 2023-03-30T17:03:03.257668Z, duration: 0, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m pip install --upgrade --no-cache-dir pip Requirement already satisfied: pip in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (23.0.1) [rtd-command-info] start-time: 2023-03-30T17:03:03.342315Z, end-time: 2023-03-30T17:03:30.953731Z, duration: 27, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m pip install --upgrade --no-cache-dir jinja2==2.11.3 markupsafe==2.0.1 Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 mkdocs<1.1 Collecting jinja2==2.11.3 Downloading Jinja2-2.11.3-py2.py3-none-any.whl (125 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 125.7/125.7 kB 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sha256=d27164b58b1418062cedcdc645ad72be68c7d3b9a4d1ed4d13cf9683fb33e040 Stored in directory: /tmp/pip-ephem-wheel-cache-ktazt1_9/wheels/5f/a8/6b/5b7b3f764d879214eb03570f74d2b086201eb514e6ffa68d6d Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.3-py3-none-any.whl size=492022 sha256=537236c8ea89720c3af75352992b6ecf80de5b1a930edc80f33084608c499823 Stored in directory: /tmp/pip-ephem-wheel-cache-ktazt1_9/wheels/a0/0b/ee/e6994fadb42c1354dcccb139b0bf2795271bddfe6253ccdf11 Successfully built mock pillow future Installing collected packages: snowballstemmer, pytz, Pygments, mock, docutils, zipp, urllib3, tornado, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, six, setuptools, PyYAML, pillow, packaging, markupsafe, imagesize, idna, future, click, charset-normalizer, certifi, babel, alabaster, requests, livereload, jinja2, importlib-metadata, commonmark, sphinx, Markdown, recommonmark, mkdocs Attempting uninstall: setuptools Found existing installation: setuptools 67.6.1 Uninstalling setuptools-67.6.1: Successfully uninstalled setuptools-67.6.1 Successfully installed Markdown-3.4.3 PyYAML-6.0 Pygments-2.3.1 alabaster-0.7.13 babel-2.12.1 certifi-2022.12.7 charset-normalizer-3.1.0 click-8.1.3 commonmark-0.8.1 docutils-0.14 future-0.18.3 idna-3.4 imagesize-1.4.1 importlib-metadata-6.1.0 jinja2-2.11.3 livereload-2.6.3 markupsafe-2.0.1 mkdocs-1.0.4 mock-1.0.1 packaging-23.0 pillow-5.4.1 pytz-2023.3 recommonmark-0.5.0 requests-2.28.2 setuptools-41.0.1 six-1.16.0 snowballstemmer-2.2.0 sphinx-5.1.1 sphinxcontrib-applehelp-1.0.4 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.1 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.3 sphinxcontrib-serializinghtml-1.1.5 tornado-6.2 urllib3-1.26.15 zipp-3.15.0 [rtd-command-info] start-time: 2023-03-30T17:03:31.043210Z, end-time: 2023-03-30T17:03:45.082865Z, duration: 14, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt Collecting mkdocs==1.4.2 Downloading mkdocs-1.4.2-py3-none-any.whl (3.7 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.7/3.7 MB 30.8 MB/s eta 0:00:00 Collecting mkdocs-material==9.0.15 Downloading mkdocs_material-9.0.15-py3-none-any.whl (7.7 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.7/7.7 MB 145.9 MB/s eta 0:00:00 Collecting mkdocstrings[python]==0.19 Downloading mkdocstrings-0.19.0-py3-none-any.whl (25 kB) Collecting mkdocs-glightbox Downloading mkdocs_glightbox-0.3.2-py3-none-any.whl (28 kB) Collecting mkdocs-section-index==0.3.5 Downloading mkdocs_section_index-0.3.5-py3-none-any.whl (8.6 kB) Collecting mkdocs-literate-nav==0.5.0 Downloading mkdocs_literate_nav-0.5.0-py3-none-any.whl (12 kB) Collecting mkdocs-redirects==1.2.0 Downloading mkdocs-redirects-1.2.0.tar.gz (5.7 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting mkdocs-jupyter==0.24.0 Downloading mkdocs_jupyter-0.24.0-py3-none-any.whl (3.9 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.9/3.9 MB 161.1 MB/s eta 0:00:00 Collecting mkdocs-gen-files==0.4.0 Downloading mkdocs_gen_files-0.4.0-py3-none-any.whl (8.1 kB) Collecting watchdog>=2.0 Downloading watchdog-3.0.0-py3-none-manylinux2014_x86_64.whl (82 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 82.1/82.1 kB 178.2 MB/s eta 0:00:00 Requirement already satisfied: click>=7.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from mkdocs==1.4.2->-r docs/requirements.txt (line 1)) (8.1.3) Requirement already satisfied: pyyaml>=5.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from mkdocs==1.4.2->-r docs/requirements.txt (line 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eta 0:00:00 Collecting mistune<3,>=2.0.3 Downloading mistune-2.0.5-py2.py3-none-any.whl (24 kB) Collecting bleach Downloading bleach-6.0.0-py3-none-any.whl (162 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 162.5/162.5 kB 197.8 MB/s eta 0:00:00 Collecting jupyter-core>=4.7 Downloading jupyter_core-5.3.0-py3-none-any.whl (93 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 93.2/93.2 kB 181.4 MB/s eta 0:00:00 Collecting jupyterlab-pygments Downloading jupyterlab_pygments-0.2.2-py2.py3-none-any.whl (21 kB) Requirement already satisfied: charset-normalizer<4,>=2 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from requests>=2.26->mkdocs-material==9.0.15->-r docs/requirements.txt (line 2)) (3.1.0) Requirement already satisfied: certifi>=2017.4.17 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from requests>=2.26->mkdocs-material==9.0.15->-r docs/requirements.txt (line 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0:00:00 Collecting pyzmq>=23.0 Downloading pyzmq-25.0.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (1.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.1/1.1 MB 201.7 MB/s eta 0:00:00 Requirement already satisfied: tornado>=6.2 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from jupyter-client>=6.1.12->nbclient>=0.5.0->nbconvert<8,>=7.2.9->mkdocs-jupyter==0.24.0->-r docs/requirements.txt (line 8)) (6.2) Building wheels for collected packages: mkdocs-redirects Building wheel for mkdocs-redirects (setup.py): started Building wheel for mkdocs-redirects (setup.py): finished with status 'done' Created wheel for mkdocs-redirects: filename=mkdocs_redirects-1.2.0-py3-none-any.whl size=6055 sha256=97dcb433840130ddc20c1106bd1f41d10fda7519f4b78ffcc09753eafc07da75 Stored in directory: /tmp/pip-ephem-wheel-cache-w1qzk4rn/wheels/56/27/09/2113947d506c30867dbf5b5ab09a5434c50757a976e6ac2f1f Successfully built mkdocs-redirects Installing collected packages: webencodings, mistune, fastjsonschema, watchdog, traitlets, toml, tinycss2, soupsieve, regex, pyzmq, pyyaml-env-tag, python-dateutil, pyrsistent, pygments, platformdirs, pkgutil-resolve-name, pandocfilters, mkdocs-material-extensions, mergedeep, mdurl, jupyterlab-pygments, jinja2, importlib-resources, defusedxml, colorama, bleach, attrs, markdown-it-py, markdown, jupyter-core, jsonschema, griffe, ghp-import, beautifulsoup4, pymdown-extensions, nbformat, mkdocs-glightbox, mkdocs, mdit-py-plugins, jupyter-client, nbclient, mkdocs-section-index, mkdocs-redirects, mkdocs-material, mkdocs-literate-nav, mkdocs-gen-files, mkdocs-autorefs, jupytext, nbconvert, mkdocstrings, mkdocstrings-python, mkdocs-jupyter Attempting uninstall: pygments Found existing installation: Pygments 2.3.1 Uninstalling Pygments-2.3.1: Successfully uninstalled Pygments-2.3.1 Attempting uninstall: jinja2 Found existing installation: Jinja2 2.11.3 Uninstalling Jinja2-2.11.3: Successfully uninstalled Jinja2-2.11.3 Attempting uninstall: markdown Found existing installation: Markdown 3.4.3 Uninstalling Markdown-3.4.3: Successfully uninstalled Markdown-3.4.3 Attempting uninstall: mkdocs Found existing installation: mkdocs 1.0.4 Uninstalling mkdocs-1.0.4: Successfully uninstalled mkdocs-1.0.4 Successfully installed attrs-22.2.0 beautifulsoup4-4.12.0 bleach-6.0.0 colorama-0.4.6 defusedxml-0.7.1 fastjsonschema-2.16.3 ghp-import-2.1.0 griffe-0.25.5 importlib-resources-5.12.0 jinja2-3.1.2 jsonschema-4.17.3 jupyter-client-8.1.0 jupyter-core-5.3.0 jupyterlab-pygments-0.2.2 jupytext-1.14.5 markdown-3.3.7 markdown-it-py-2.2.0 mdit-py-plugins-0.3.5 mdurl-0.1.2 mergedeep-1.3.4 mistune-2.0.5 mkdocs-1.4.2 mkdocs-autorefs-0.4.1 mkdocs-gen-files-0.4.0 mkdocs-glightbox-0.3.2 mkdocs-jupyter-0.24.0 mkdocs-literate-nav-0.5.0 mkdocs-material-9.0.15 mkdocs-material-extensions-1.1.1 mkdocs-redirects-1.2.0 mkdocs-section-index-0.3.5 mkdocstrings-0.19.0 mkdocstrings-python-0.8.3 nbclient-0.7.2 nbconvert-7.2.10 nbformat-5.8.0 pandocfilters-1.5.0 pkgutil-resolve-name-1.3.10 platformdirs-3.2.0 pygments-2.14.0 pymdown-extensions-9.10 pyrsistent-0.19.3 python-dateutil-2.8.2 pyyaml-env-tag-0.1 pyzmq-25.0.2 regex-2023.3.23 soupsieve-2.4 tinycss2-1.2.1 toml-0.10.2 traitlets-5.9.0 watchdog-3.0.0 webencodings-0.5.1 [rtd-command-info] start-time: 2023-03-30T17:03:45.172442Z, end-time: 2023-03-30T17:04:47.434408Z, duration: 62, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m pip install --upgrade --upgrade-strategy eager --no-cache-dir . Processing /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/checkouts/latest Installing build dependencies: started Installing build dependencies: finished with status 'done' Getting requirements to build wheel: started Getting requirements to build wheel: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Collecting sphinx==1.8.5 Downloading Sphinx-1.8.5-py2.py3-none-any.whl (3.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.1/3.1 MB 27.2 MB/s eta 0:00:00 Collecting sharedmem==0.3.8 Downloading sharedmem-0.3.8.tar.gz (17 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting ipyparallel==6.2.4 Downloading ipyparallel-6.2.4-py2.py3-none-any.whl (198 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 198.6/198.6 kB 207.1 MB/s eta 0:00:00 Collecting jupyter-core==4.10.0 Downloading jupyter_core-4.10.0-py3-none-any.whl (87 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 87.3/87.3 kB 195.5 MB/s eta 0:00:00 Collecting princess==0.5 Downloading princess-0.5-py3-none-any.whl (4.2 kB) Collecting ipykernel==5.1.4 Downloading ipykernel-5.1.4-py3-none-any.whl (116 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 116.8/116.8 kB 185.2 MB/s eta 0:00:00 Collecting ipython==7.12.0 Downloading ipython-7.12.0-py3-none-any.whl (777 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 777.3/777.3 kB 230.2 MB/s eta 0:00:00 Collecting xarray==2022.3.0 Downloading xarray-2022.3.0-py3-none-any.whl (870 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 870.9/870.9 kB 175.1 MB/s eta 0:00:00 Collecting Cython==0.29.21 Downloading Cython-0.29.21-cp38-cp38-manylinux1_x86_64.whl (1.9 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.9/1.9 MB 183.4 MB/s eta 0:00:00 Collecting astcheck==0.3.0 Downloading astcheck-0.3.0-py3-none-any.whl (4.9 kB) Collecting pypandoc==1.4 Downloading pypandoc-1.4.tar.gz (27 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting EXtra-redu==0.0.7 Downloading EXtra_redu-0.0.7-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (460 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 460.9/460.9 kB 221.2 MB/s eta 0:00:00 Collecting nbconvert==5.6.1 Downloading nbconvert-5.6.1-py2.py3-none-any.whl (455 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 455.1/455.1 kB 220.8 MB/s eta 0:00:00 Collecting ipython-genutils==0.2.0 Downloading ipython_genutils-0.2.0-py2.py3-none-any.whl (26 kB) Collecting calibration-client==11.2.0 Downloading calibration_client-11.2.0-py3-none-any.whl (80 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 80.4/80.4 kB 188.0 MB/s eta 0:00:00 Collecting dynaconf==3.1.4 Downloading dynaconf-3.1.4-py2.py3-none-any.whl (197 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 197.5/197.5 kB 200.2 MB/s eta 0:00:00 Requirement already satisfied: markupsafe==2.0.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from European-XFEL-Offline-Calibration==1.0) (2.0.1) Collecting docutils==0.17.1 Downloading docutils-0.17.1-py2.py3-none-any.whl (575 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 575.5/575.5 kB 210.3 MB/s eta 0:00:00 Collecting extra-data==1.12.0 Downloading EXtra_data-1.12.0-py3-none-any.whl (133 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 133.2/133.2 kB 187.5 MB/s eta 0:00:00 Collecting dill==0.3.0 Downloading dill-0.3.0.tar.gz (151 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 151.4/151.4 kB 186.6 MB/s eta 0:00:00 Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting pasha==0.1.1 Downloading pasha-0.1.1-py3-none-any.whl (11 kB) Collecting traitlets==4.3.3 Downloading traitlets-4.3.3-py2.py3-none-any.whl (75 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 75.7/75.7 kB 157.1 MB/s eta 0:00:00 Collecting requests==2.22.0 Downloading requests-2.22.0-py2.py3-none-any.whl (57 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 58.0/58.0 kB 173.1 MB/s eta 0:00:00 Collecting scipy==1.7.0 Downloading scipy-1.7.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (28.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 28.4/28.4 MB 155.7 MB/s eta 0:00:00 Collecting cfelpyutils==2.0.6 Downloading cfelpyutils-2.0.6-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (511 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 511.2/511.2 kB 229.4 MB/s eta 0:00:00 Collecting gitpython==3.1.0 Downloading GitPython-3.1.0-py3-none-any.whl (450 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 450.7/450.7 kB 229.4 MB/s eta 0:00:00 Collecting lxml==4.5.0 Downloading lxml-4.5.0-cp38-cp38-manylinux1_x86_64.whl (5.6 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 5.6/5.6 MB 144.1 MB/s eta 0:00:00 Collecting env-cache==0.1 Downloading env_cache-0.1-py2.py3-none-any.whl (4.7 kB) Requirement already satisfied: python-dateutil==2.8.2 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from European-XFEL-Offline-Calibration==1.0) (2.8.2) Collecting jupyter-console==6.1.0 Downloading jupyter_console-6.1.0-py2.py3-none-any.whl (21 kB) Collecting nbclient==0.5.1 Downloading nbclient-0.5.1-py3-none-any.whl (65 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 65.7/65.7 kB 185.1 MB/s eta 0:00:00 Collecting Jinja2==2.11.2 Downloading Jinja2-2.11.2-py2.py3-none-any.whl (125 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 125.8/125.8 kB 187.7 MB/s eta 0:00:00 Collecting notebook==6.1.5 Downloading notebook-6.1.5-py3-none-any.whl (9.5 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 9.5/9.5 MB 154.7 MB/s eta 0:00:00 Collecting nbformat==5.0.7 Downloading nbformat-5.0.7-py3-none-any.whl (170 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 170.6/170.6 kB 227.9 MB/s eta 0:00:00 Collecting jupyter-client==7.3.4 Downloading jupyter_client-7.3.4-py3-none-any.whl (132 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 132.1/132.1 kB 208.2 MB/s eta 0:00:00 Collecting pyzmq==23.2.0 Downloading pyzmq-23.2.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (1.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.1/1.1 MB 107.9 MB/s eta 0:00:00 Collecting prettytable==0.7.2 Downloading prettytable-0.7.2.zip (28 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting scikit-learn==0.22.2.post1 Downloading scikit_learn-0.22.2.post1-cp38-cp38-manylinux1_x86_64.whl (7.0 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.0/7.0 MB 154.2 MB/s eta 0:00:00 Collecting kafka-python==2.0.2 Downloading kafka_python-2.0.2-py2.py3-none-any.whl (246 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 246.5/246.5 kB 209.5 MB/s eta 0:00:00 Collecting tabulate==0.8.6 Downloading tabulate-0.8.6.tar.gz (45 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 45.5/45.5 kB 174.8 MB/s eta 0:00:00 Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting extra-geom==1.8.0 Downloading EXtra_geom-1.8.0-py3-none-any.whl (83 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 83.3/83.3 kB 148.9 MB/s eta 0:00:00 Collecting nbparameterise==0.6 Downloading nbparameterise-0.6-py3-none-any.whl (7.7 kB) Collecting h5py==3.5.0 Downloading h5py-3.5.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (4.5 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.5/4.5 MB 143.8 MB/s eta 0:00:00 Collecting iminuit==1.3.8 Downloading iminuit-1.3.8-cp38-cp38-manylinux2010_x86_64.whl (4.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.3/4.3 MB 135.8 MB/s eta 0:00:00 Collecting matplotlib==3.4.2 Downloading matplotlib-3.4.2-cp38-cp38-manylinux1_x86_64.whl (10.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.3/10.3 MB 139.5 MB/s eta 0:00:00 Collecting numpy==1.20.3 Downloading numpy-1.20.3-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (15.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 15.4/15.4 MB 158.6 MB/s eta 0:00:00 Collecting pyyaml==5.3 Downloading PyYAML-5.3.tar.gz (268 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 268.2/268.2 kB 215.5 MB/s eta 0:00:00 Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting metadata-client==3.0.8 Downloading metadata_client-3.0.8-py3-none-any.whl (109 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 109.9/109.9 kB 190.1 MB/s eta 0:00:00 Collecting oauthlib Downloading oauthlib-3.2.2-py3-none-any.whl (151 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 151.7/151.7 kB 207.9 MB/s eta 0:00:00 Requirement already satisfied: pytz in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from calibration-client==11.2.0->European-XFEL-Offline-Calibration==1.0) (2023.3) Collecting requests-oauthlib Downloading requests_oauthlib-1.3.1-py2.py3-none-any.whl (23 kB) Collecting oauth2-xfel-client>=6.1 Downloading oauth2_xfel_client-6.1.1-py3-none-any.whl (9.8 kB) Collecting pandas>=1.1.5 Downloading pandas-1.5.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (12.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 12.2/12.2 MB 121.9 MB/s eta 0:00:00 Collecting mypy-extensions>=0.4.3 Downloading mypy_extensions-1.0.0-py3-none-any.whl (4.7 kB) Collecting euxfel-bunch-pattern>=0.6 Downloading euxfel_bunch_pattern-0.6-py3-none-any.whl (5.3 kB) Collecting gitdb<5,>=4.0.1 Downloading gitdb-4.0.10-py3-none-any.whl (62 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 62.7/62.7 kB 156.8 MB/s eta 0:00:00 Requirement already satisfied: tornado>=4.2 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from ipykernel==5.1.4->European-XFEL-Offline-Calibration==1.0) (6.2) Collecting decorator Downloading decorator-5.1.1-py3-none-any.whl (9.1 kB) Collecting pexpect Downloading pexpect-4.8.0-py2.py3-none-any.whl (59 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 59.0/59.0 kB 182.8 MB/s eta 0:00:00 Collecting pickleshare Downloading pickleshare-0.7.5-py2.py3-none-any.whl (6.9 kB) Collecting prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 Downloading prompt_toolkit-3.0.38-py3-none-any.whl (385 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 385.8/385.8 kB 224.0 MB/s eta 0:00:00 Requirement already satisfied: pygments in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (2.14.0) Requirement already satisfied: setuptools>=18.5 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (41.0.1) Collecting setuptools>=18.5 Downloading setuptools-67.6.1-py3-none-any.whl (1.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.1/1.1 MB 225.9 MB/s eta 0:00:00 Collecting backcall Downloading backcall-0.2.0-py2.py3-none-any.whl (11 kB) Collecting jedi>=0.10 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Requirement already satisfied: defusedxml in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) (0.7.1) Collecting testpath Downloading testpath-0.6.0-py3-none-any.whl (83 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 83.9/83.9 kB 188.1 MB/s eta 0:00:00 Collecting mistune<2,>=0.8.1 Downloading mistune-0.8.4-py2.py3-none-any.whl (16 kB) Requirement already satisfied: bleach in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) (6.0.0) Requirement already satisfied: pandocfilters>=1.4.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) (1.5.0) Requirement already satisfied: jsonschema!=2.5.0,>=2.4 in 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pypandoc==1.4->European-XFEL-Offline-Calibration==1.0) (0.40.0) Requirement already satisfied: six>=1.5 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from python-dateutil==2.8.2->European-XFEL-Offline-Calibration==1.0) (1.16.0) Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 Downloading urllib3-1.25.11-py2.py3-none-any.whl (127 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 128.0/128.0 kB 179.0 MB/s eta 0:00:00 Collecting chardet<3.1.0,>=3.0.2 Downloading chardet-3.0.4-py2.py3-none-any.whl (133 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 133.4/133.4 kB 204.2 MB/s eta 0:00:00 Requirement already satisfied: certifi>=2017.4.17 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from requests==2.22.0->European-XFEL-Offline-Calibration==1.0) (2022.12.7) Collecting idna<2.9,>=2.5 Downloading idna-2.8-py2.py3-none-any.whl (58 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 58.6/58.6 kB 180.0 MB/s eta 0:00:00 Collecting joblib>=0.11 Downloading joblib-1.2.0-py3-none-any.whl (297 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 298.0/298.0 kB 208.0 MB/s eta 0:00:00 Collecting sphinxcontrib-websupport Downloading sphinxcontrib_websupport-1.2.4-py2.py3-none-any.whl (39 kB) Requirement already satisfied: packaging in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (23.0) Requirement already satisfied: alabaster<0.8,>=0.7 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (0.7.13) Requirement already satisfied: snowballstemmer>=1.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (2.2.0) Requirement 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attrs>=17.4.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from jsonschema!=2.5.0,>=2.4->nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (22.2.0) Requirement already satisfied: pkgutil-resolve-name>=1.3.10 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from jsonschema!=2.5.0,>=2.4->nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (1.3.10) Requirement already satisfied: importlib-resources>=1.4.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from jsonschema!=2.5.0,>=2.4->nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (5.12.0) Collecting wcwidth Downloading wcwidth-0.2.6-py2.py3-none-any.whl (29 kB) Collecting ptyprocess Downloading ptyprocess-0.7.0-py2.py3-none-any.whl (13 kB) Collecting argon2-cffi-bindings Downloading argon2_cffi_bindings-21.2.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (86 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 86.2/86.2 kB 183.4 MB/s eta 0:00:00 Requirement already satisfied: webencodings in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from bleach->nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) (0.5.1) Requirement already satisfied: sphinxcontrib-serializinghtml in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from sphinxcontrib-websupport->sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (1.1.5) Requirement already satisfied: zipp>=3.1.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/lib/python3.8/site-packages (from importlib-resources>=1.4.0->jsonschema!=2.5.0,>=2.4->nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (3.15.0) Collecting cffi>=1.0.1 Downloading cffi-1.15.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (442 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 442.7/442.7 kB 221.6 MB/s eta 0:00:00 Collecting pycparser Downloading pycparser-2.21-py2.py3-none-any.whl (118 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 118.7/118.7 kB 207.3 MB/s eta 0:00:00 Building wheels for collected packages: European-XFEL-Offline-Calibration, dill, prettytable, pypandoc, pyyaml, sharedmem, tabulate Building wheel for European-XFEL-Offline-Calibration (pyproject.toml): started Building wheel for European-XFEL-Offline-Calibration (pyproject.toml): finished with status 'done' Created wheel for European-XFEL-Offline-Calibration: filename=European_XFEL_Offline_Calibration-1.0-cp38-cp38-linux_x86_64.whl size=1599557 sha256=3009f37dc15c6716a45197c93326fde76d123e4461c03dd654981da4837b2b66 Stored in directory: /tmp/pip-ephem-wheel-cache-m4fp23sz/wheels/72/93/0a/52bfcaf2aa78260765507f5ca61897968faedf7c76a31dba2d Building wheel for dill (setup.py): started Building wheel for dill (setup.py): finished with status 'done' Created wheel for dill: filename=dill-0.3.0-py3-none-any.whl size=77512 sha256=e247d02cf1e617f7cba5ef7c103ba208dda1516574b753ff6c15699a881a659e Stored in directory: /tmp/pip-ephem-wheel-cache-m4fp23sz/wheels/ec/e7/fb/9b59e2dbda9eeefab51f7cb41df434ff463c4afe1985abff24 Building wheel for prettytable (setup.py): started Building wheel for prettytable (setup.py): finished with status 'done' Created wheel for prettytable: filename=prettytable-0.7.2-py3-none-any.whl size=13699 sha256=2b9d7f06db1daaaec20c7a99cc27f5452c4b11b5bfe876105a9e351a969c59de Stored in directory: /tmp/pip-ephem-wheel-cache-m4fp23sz/wheels/48/6d/77/9517cb933af254f51a446f1a5ec9c2be3e45f17384940bce68 Building wheel for pypandoc (setup.py): started Building wheel for pypandoc (setup.py): finished with status 'done' Created wheel for pypandoc: filename=pypandoc-1.4-py3-none-any.whl size=16716 sha256=a4459249ef32ab12c0dd4e330309588f2fbc3a587bebc165a79a63b217975c89 Stored in directory: /tmp/pip-ephem-wheel-cache-m4fp23sz/wheels/f7/d9/a0/ef1fe56c058e41d6271a4935caaeae89d43e2280504690a329 Building wheel for pyyaml (setup.py): started Building wheel for pyyaml (setup.py): finished with status 'done' Created wheel for pyyaml: filename=PyYAML-5.3-cp38-cp38-linux_x86_64.whl size=44227 sha256=6e23bb8874d9bfaf3f92e2b458ef420e059ab2f03f31d5e880da5275d5cd1df6 Stored in directory: /tmp/pip-ephem-wheel-cache-m4fp23sz/wheels/e4/94/ec/65e430f66fda7a86c08f61ce59455581adc269a65881b4ffeb Building wheel for sharedmem (setup.py): started Building wheel for sharedmem (setup.py): finished with status 'done' Created wheel for sharedmem: filename=sharedmem-0.3.8-py3-none-any.whl size=18342 sha256=c89fbc2e6c445390c19df0e0610cc636548bed73187c05993160875706cdd101 Stored in directory: /tmp/pip-ephem-wheel-cache-m4fp23sz/wheels/ee/ef/25/9562dc56f11d2b55824c1b1547eff68b75f1a0117d3b0867dd Building wheel for tabulate (setup.py): started Building wheel for tabulate (setup.py): finished with status 'done' Created wheel for tabulate: filename=tabulate-0.8.6-py3-none-any.whl size=23273 sha256=2af604f1f1b2f54770e51ef910f2b16cb62133eb185f2cb7c462cddc9b0168e7 Stored in directory: /tmp/pip-ephem-wheel-cache-m4fp23sz/wheels/86/8c/d9/3b6c2f55efaefe656c52b725d2fdc5669085c83444979db8b3 Successfully built European-XFEL-Offline-Calibration dill prettytable pypandoc pyyaml sharedmem tabulate Installing collected packages: wcwidth, tabulate, Send2Trash, ptyprocess, prettytable, pickleshare, mistune, kafka-python, ipython-genutils, env-cache, dynaconf, chardet, backcall, urllib3, testpath, terminado, sphinxcontrib-websupport, smmap, setuptools, pyzmq, pyyaml, pyparsing, pycparser, prompt-toolkit, prometheus-client, pillow, pexpect, parso, oauthlib, numpy, nest-asyncio, mypy-extensions, lxml, kiwisolver, joblib, Jinja2, idna, entrypoints, docutils, dill, decorator, Cython, cycler, async-generator, astcheck, traitlets, sharedmem, scipy, requests, pypandoc, pasha, pandas, matplotlib, jedi, iminuit, h5py, gitdb, euxfel-bunch-pattern, cffi, xarray, sphinx, scikit-learn, requests-oauthlib, jupyter-core, ipython, gitpython, cfelpyutils, argon2-cffi-bindings, oauth2-xfel-client, nbformat, jupyter-client, extra-geom, extra-data, argon2-cffi, nbconvert, nbclient, metadata-client, ipykernel, EXtra-redu, calibration-client, princess, notebook, nbparameterise, jupyter-console, ipyparallel, European-XFEL-Offline-Calibration Attempting uninstall: mistune Found existing installation: mistune 2.0.5 Uninstalling mistune-2.0.5: Successfully uninstalled mistune-2.0.5 Attempting uninstall: urllib3 Found existing installation: urllib3 1.26.15 Uninstalling urllib3-1.26.15: Successfully uninstalled urllib3-1.26.15 Attempting uninstall: setuptools Found existing installation: setuptools 41.0.1 Uninstalling setuptools-41.0.1: Successfully uninstalled setuptools-41.0.1 Attempting uninstall: pyzmq Found existing installation: pyzmq 25.0.2 Uninstalling pyzmq-25.0.2: Successfully uninstalled pyzmq-25.0.2 Attempting uninstall: pyyaml Found existing installation: PyYAML 6.0 Uninstalling PyYAML-6.0: Successfully uninstalled PyYAML-6.0 Attempting uninstall: pillow Found existing installation: Pillow 5.4.1 Uninstalling Pillow-5.4.1: Successfully uninstalled Pillow-5.4.1 Attempting uninstall: Jinja2 Found existing installation: Jinja2 3.1.2 Uninstalling Jinja2-3.1.2: Successfully uninstalled Jinja2-3.1.2 Attempting uninstall: idna Found existing installation: idna 3.4 Uninstalling idna-3.4: Successfully uninstalled idna-3.4 Attempting uninstall: docutils Found existing installation: docutils 0.14 Uninstalling docutils-0.14: Successfully uninstalled docutils-0.14 Attempting uninstall: traitlets Found existing installation: traitlets 5.9.0 Uninstalling traitlets-5.9.0: Successfully uninstalled traitlets-5.9.0 Attempting uninstall: requests Found existing installation: requests 2.28.2 Uninstalling requests-2.28.2: Successfully uninstalled requests-2.28.2 Attempting uninstall: sphinx Found existing installation: Sphinx 5.1.1 Uninstalling Sphinx-5.1.1: Successfully uninstalled Sphinx-5.1.1 Attempting uninstall: jupyter-core Found existing installation: jupyter_core 5.3.0 Uninstalling jupyter_core-5.3.0: Successfully uninstalled jupyter_core-5.3.0 Attempting uninstall: nbformat Found existing installation: nbformat 5.8.0 Uninstalling nbformat-5.8.0: Successfully uninstalled nbformat-5.8.0 Attempting uninstall: jupyter-client Found existing installation: jupyter_client 8.1.0 Uninstalling jupyter_client-8.1.0: Successfully uninstalled jupyter_client-8.1.0 Attempting uninstall: nbconvert Found existing installation: nbconvert 7.2.10 Uninstalling nbconvert-7.2.10: Successfully uninstalled nbconvert-7.2.10 Attempting uninstall: nbclient Found existing installation: nbclient 0.7.2 Uninstalling nbclient-0.7.2: Successfully uninstalled nbclient-0.7.2 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. mkdocs-material 9.0.15 requires jinja2>=3.0, but you have jinja2 2.11.2 which is incompatible. mkdocs-material 9.0.15 requires requests>=2.26, but you have requests 2.22.0 which is incompatible. mkdocs-jupyter 0.24.0 requires nbconvert<8,>=7.2.9, but you have nbconvert 5.6.1 which is incompatible. Successfully installed Cython-0.29.21 EXtra-redu-0.0.7 European-XFEL-Offline-Calibration-1.0 Jinja2-2.11.2 Send2Trash-1.8.0 argon2-cffi-21.3.0 argon2-cffi-bindings-21.2.0 astcheck-0.3.0 async-generator-1.10 backcall-0.2.0 calibration-client-11.2.0 cfelpyutils-2.0.6 cffi-1.15.1 chardet-3.0.4 cycler-0.11.0 decorator-5.1.1 dill-0.3.0 docutils-0.17.1 dynaconf-3.1.4 entrypoints-0.4 env-cache-0.1 euxfel-bunch-pattern-0.6 extra-data-1.12.0 extra-geom-1.8.0 gitdb-4.0.10 gitpython-3.1.0 h5py-3.5.0 idna-2.8 iminuit-1.3.8 ipykernel-5.1.4 ipyparallel-6.2.4 ipython-7.12.0 ipython-genutils-0.2.0 jedi-0.18.2 joblib-1.2.0 jupyter-client-7.3.4 jupyter-console-6.1.0 jupyter-core-4.10.0 kafka-python-2.0.2 kiwisolver-1.4.4 lxml-4.5.0 matplotlib-3.4.2 metadata-client-3.0.8 mistune-0.8.4 mypy-extensions-1.0.0 nbclient-0.5.1 nbconvert-5.6.1 nbformat-5.0.7 nbparameterise-0.6 nest-asyncio-1.5.6 notebook-6.1.5 numpy-1.20.3 oauth2-xfel-client-6.1.1 oauthlib-3.2.2 pandas-1.5.3 parso-0.8.3 pasha-0.1.1 pexpect-4.8.0 pickleshare-0.7.5 pillow-9.4.0 prettytable-0.7.2 princess-0.5 prometheus-client-0.16.0 prompt-toolkit-3.0.38 ptyprocess-0.7.0 pycparser-2.21 pypandoc-1.4 pyparsing-3.0.9 pyyaml-5.3 pyzmq-23.2.0 requests-2.22.0 requests-oauthlib-1.3.1 scikit-learn-0.22.2.post1 scipy-1.7.0 setuptools-67.6.1 sharedmem-0.3.8 smmap-5.0.0 sphinx-1.8.5 sphinxcontrib-websupport-1.2.4 tabulate-0.8.6 terminado-0.17.1 testpath-0.6.0 traitlets-4.3.3 urllib3-1.25.11 wcwidth-0.2.6 xarray-2022.3.0 [rtd-command-info] start-time: 2023-03-30T17:04:47.659567Z, end-time: 2023-03-30T17:04:47.721657Z, duration: 0, exit-code: 0 cat mkdocs.yml copyright: '© 2018 European XFEL' docs_dir: /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/checkouts/latest/docs extra_css: - css/custom.css - http://rtd.xfel.eu/static/css/badge_only.css - http://rtd.xfel.eu/static/css/readthedocs-doc-embed.css extra_javascript: - readthedocs-data.js - http://rtd.xfel.eu/static/core/js/readthedocs-doc-embed.js - http://rtd.xfel.eu/static/javascript/readthedocs-analytics.js google_analytics: null markdown_extensions: - pymdownx.highlight: anchor_linenums: true - pymdownx.inlinehilite - pymdownx.snippets - pymdownx.tasklist - pymdownx.arithmatex: generic: true - pymdownx.tabbed: null - pymdownx.details - pymdownx.mark - pymdownx.emoji: null - attr_list - def_list - footnotes - md_in_html - toc: permalink: true - admonition - tables - codehilite nav: - index.md - Operation: - Available Calibration notebooks: operation/available_notebooks.md - CALCAT: operation/calibration_database.md - myMDC: operation/myMDC.md - Calibration webservice: operation/webservice.md - Troubleshooting: - Correcting detector RAW data: operation/troubleshooting_correction.md - Calibration constant generation: operation/troubleshooting_calibration_generation.md - Development: - Installation: development/installation.md - Workflow: development/workflow.md - Configuration: development/configuration.md - Advanced topics: development/advanced.md - Code Reference: reference/SUMMARY.md - Reference: - FAQ: references/faq.md - Changelog: references/changelog.md - Glossary: references/glossary.md plugins: - glightbox - mkdocstrings: handlers: python: docstring_section_style: list docstring_style: sphinx import: - https://docs.python-requests.org/en/master/objects.inv paths: - src syntax: sphinx - search - autorefs - mkdocs-jupyter: allow_errors: false include: - '*.ipynb' - gen-files: scripts: - docs/gen_ref_pages.py - literate-nav: nav_file: SUMMARY.md repo_url: https://git.xfel.eu/calibration/pycalibration site_name: EuXFEL Offline calibration theme: features: - navigation.tabs - navigation.sections - navigation.top - search.suggest - search.highlight - content.tabs.link - content.code.annotation - content.code.copy - navigation.indexes language: en name: material palette: - scheme: light toggle: icon: material/lightbulb name: Switch to dark mode - scheme: slate toggle: icon: material/lightbulb-outline name: Switch to light mode [rtd-command-info] start-time: 2023-03-30T17:04:47.805215Z, end-time: 2023-03-30T17:05:13.003146Z, duration: 25, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/envs/latest/bin/python -m mkdocs build --clean --site-dir _build/html --config-file mkdocs.yml INFO - Cleaning site directory INFO - Building documentation to directory: /usr/src/app/checkouts/readthedocs.org/user_builds/test-pycalibration/checkouts/latest/_build/html INFO - The following pages exist in the docs directory, but are not included in the "nav" configuration: - operation.md - overview.md - reference/cal_tools/__init__.md - reference/cal_tools/agipdlib.md - reference/cal_tools/agipdutils.md - reference/cal_tools/agipdutils_ff.md - reference/cal_tools/ana_tools.md - reference/cal_tools/calcat_interface.md - reference/cal_tools/dssclib.md - reference/cal_tools/enums.md - reference/cal_tools/files.md - reference/cal_tools/h5_copy_except.md - reference/cal_tools/jfstrixel.md - reference/cal_tools/jungfraulib.md - reference/cal_tools/lpdlib.md - reference/cal_tools/metrology.md - reference/cal_tools/plotting.md - reference/cal_tools/pnccdlib.md - reference/cal_tools/step_timing.md - reference/cal_tools/tools.md - reference/cal_tools/epix100/__init__.md - reference/cal_tools/epix100/epix100lib.md - reference/cal_tools/gotthard2/__init__.md - reference/cal_tools/gotthard2/gotthard2lib.md - reference/xfel_calibrate/VERSION.md - reference/xfel_calibrate/__init__.md - reference/xfel_calibrate/calibrate.md - reference/xfel_calibrate/finalize.md - reference/xfel_calibrate/nb_args.md - reference/xfel_calibrate/repeat.md ERROR - griffe: Failed to parse annotation from 'Tuple' node at cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'BoolOp' node at cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'BoolOp' node at cal_tools/calcat_interface.py:1 WARNING - griffe: cal_tools/calcat_interface.py:250: No type or annotation for returned value 1 WARNING - griffe: cal_tools/calcat_interface.py:119: Parameter 'caldata' does not appear in the function signature WARNING - griffe: cal_tools/calcat_interface.py:123: No type or annotation for returned value 1 WARNING - griffe: cal_tools/calcat_interface.py:494: No type or annotation for returned value 1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'BoolOp' node at cal_tools/calcat_interface.py:1 WARNING - griffe: cal_tools/calcat_interface.py:400: No type or annotation for parameter '**condition_params' WARNING - griffe: cal_tools/calcat_interface.py:400: Parameter '**condition_params' does not appear in the function signature ERROR - griffe: Failed to parse annotation from 'Tuple' node at cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at cal_tools/calcat_interface.py:1 WARNING - griffe: cal_tools/calcat_interface.py:566: No type or annotation for returned value 1 WARNING - griffe: cal_tools/calcat_interface.py:464: Failed to get 'name: description' pair from 'Any further keyword arguments are passed on to' WARNING - griffe: cal_tools/calcat_interface.py:465: Failed to get 'name: description' pair from 'CalibrationClient.__init__().' WARNING - griffe: cal_tools/calcat_interface.py:468: No type or annotation for returned value 1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at cal_tools/calcat_interface.py:1 WARNING - griffe: cal_tools/calcat_interface.py:851: No type or annotation for returned value 1 WARNING - Documentation file 'reference/cal_tools/calcat_interface.md' contains a link to 'reference/xfel-calibrate_cli_process_no_caldbremote.png' which is not found in the documentation files. WARNING - griffe: cal_tools/files.py:480: No type or annotation for returned value 1 WARNING - griffe: cal_tools/files.py:407: No type or annotation for returned value 1 WARNING - griffe: cal_tools/files.py:436: No type or annotation for returned value 1 WARNING - griffe: cal_tools/files.py:232: No type or annotation for returned value 1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at cal_tools/files.py:1 WARNING - griffe: cal_tools/files.py:179: No type or annotation for returned value 1 WARNING - griffe: cal_tools/files.py:249: No type or annotation for returned value 1 WARNING - griffe: cal_tools/files.py:295: No type or annotation for returned value 1 WARNING - griffe: cal_tools/files.py:135: Parameter 'args,' does not appear in the function signature WARNING - griffe: cal_tools/files.py:140: No type or annotation for returned value 1 WARNING - griffe: cal_tools/files.py:555: No type or annotation for returned value 1 WARNING - griffe: cal_tools/files.py:525: No type or annotation for parameter 'kwargs' WARNING - griffe: cal_tools/files.py:529: No type or annotation for returned value 1 WARNING - griffe: cal_tools/files.py:23: No type or annotation for returned value 1 ERROR - griffe: Failed to parse annotation from 'BoolOp' node at cal_tools/files.py:1 WARNING - griffe: cal_tools/files.py:70: No type or annotation for yielded value 1 WARNING - griffe: cal_tools/files.py:43: No type or annotation for yielded value 1 WARNING - griffe: cal_tools/jfstrixel.py:124: No type or annotation for returned value 1 INFO - Documentation built in 24.11 seconds init parts: ['cal_tools'] init parts: ['cal_tools', 'epix100'] init parts: ['cal_tools', 'gotthard2'] init parts: ['xfel_calibrate']