Read the Docs build information
Build id: 26476
Project: metropc
Version: latest
Commit: 5c207672ca79400a71407bac3002b698ab5459b6
Date: 2023-07-13T06:39:23.685164Z
State: finished
Success: True


[rtd-command-info] start-time: 2023-07-13T06:39:24.962112Z, end-time: 2023-07-13T06:39:25.653042Z, duration: 0, exit-code: 0
git clone --no-single-branch --depth 50 http://git.xfel.eu/karaboDevices/metropc.git .
Cloning into '.'...

[rtd-command-info] start-time: 2023-07-13T06:39:25.915487Z, end-time: 2023-07-13T06:39:25.980480Z, duration: 0, exit-code: 0
git checkout --force origin/master
Note: checking out 'origin/master'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:

  git checkout -b <new-branch-name>

HEAD is now at 5c20767 Merge branch 'fix/rtd-docs' into 'master'

[rtd-command-info] start-time: 2023-07-13T06:39:26.065035Z, end-time: 2023-07-13T06:39:26.127725Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2023-07-13T06:39:27.358889Z, end-time: 2023-07-13T06:39:32.248128Z, duration: 4, exit-code: 0
python3.8 -mvirtualenv /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest
Using base prefix '/home/docs/.pyenv/versions/3.8.0'
New python executable in /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/bin/python3.8
Also creating executable in /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2023-07-13T06:39:32.335406Z, end-time: 2023-07-13T06:39:33.306538Z, duration: 0, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/bin/python -m pip install --upgrade --no-cache-dir pip
Requirement already satisfied: pip in /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages (23.1.2)

[rtd-command-info] start-time: 2023-07-13T06:39:33.389464Z, end-time: 2023-07-13T06:39:58.344132Z, duration: 24, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/bin/python -m pip install --upgrade --no-cache-dir jinja2==2.11.3 markupsafe==2.0.1 Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<1.1
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  Preparing metadata (setup.py): started
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Collecting six>=1.5 (from sphinx<2)
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Collecting charset-normalizer<4,>=2 (from requests>=2.0.0->sphinx<2)
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Collecting idna<4,>=2.5 (from requests>=2.0.0->sphinx<2)
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Collecting urllib3<3,>=1.21.1 (from requests>=2.0.0->sphinx<2)
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Building wheels for collected packages: mock, pillow, future
  Building wheel for mock (setup.py): started
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  Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23753 sha256=3d45a6a74d8313b5062df18b5befa971267e0a2a865f66036c60e8c42998ed1a
  Stored in directory: /tmp/pip-ephem-wheel-cache-sw1fide9/wheels/41/7c/21/90057f91c6ead7c77a90c52d6e85ca48bf82d8b0d3f8dfbb65
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  Created wheel for pillow: filename=Pillow-5.4.1-cp38-cp38-linux_x86_64.whl size=1262530 sha256=25954a0eb8d437fedff9b2a9886363e089c627b4eea2d7826264ddf4885f4c86
  Stored in directory: /tmp/pip-ephem-wheel-cache-sw1fide9/wheels/5f/a8/6b/5b7b3f764d879214eb03570f74d2b086201eb514e6ffa68d6d
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  Created wheel for future: filename=future-0.18.3-py3-none-any.whl size=492022 sha256=a64ae2ff1c54f01023cee52cadfa1ab9f80a00edfcb0fb3421dc1542e17cb4aa
  Stored in directory: /tmp/pip-ephem-wheel-cache-sw1fide9/wheels/a0/0b/ee/e6994fadb42c1354dcccb139b0bf2795271bddfe6253ccdf11
Successfully built mock pillow future
Installing collected packages: snowballstemmer, pytz, Pygments, mock, docutils, urllib3, sphinxcontrib-serializinghtml, six, setuptools, pillow, packaging, markupsafe, imagesize, idna, future, charset-normalizer, certifi, babel, alabaster, sphinxcontrib-websupport, requests, jinja2, commonmark, sphinx, readthedocs-sphinx-ext, sphinx-rtd-theme, recommonmark
  Attempting uninstall: setuptools
    Found existing installation: setuptools 68.0.0
    Uninstalling setuptools-68.0.0:
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Successfully installed Pygments-2.3.1 alabaster-0.7.13 babel-2.12.1 certifi-2023.5.7 charset-normalizer-3.2.0 commonmark-0.8.1 docutils-0.14 future-0.18.3 idna-3.4 imagesize-1.4.1 jinja2-2.11.3 markupsafe-2.0.1 mock-1.0.1 packaging-23.1 pillow-5.4.1 pytz-2023.3 readthedocs-sphinx-ext-1.0.4 recommonmark-0.5.0 requests-2.31.0 setuptools-41.0.1 six-1.16.0 snowballstemmer-2.2.0 sphinx-1.8.6 sphinx-rtd-theme-0.4.3 sphinxcontrib-serializinghtml-1.1.5 sphinxcontrib-websupport-1.2.4 urllib3-2.0.3

[rtd-command-info] start-time: 2023-07-13T06:39:58.430894Z, end-time: 2023-07-13T06:40:03.635705Z, duration: 5, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/bin/python -m pip install --exists-action=w --no-cache-dir -r doc/requirements.txt
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Installing collected packages: urllib3, numpy, Cython, requests
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  Attempting uninstall: requests
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Successfully installed Cython-0.29.36 numpy-1.24.4 requests-2.29.0 urllib3-1.26.16

[rtd-command-info] start-time: 2023-07-13T06:40:03.721551Z, end-time: 2023-07-13T06:40:43.310050Z, duration: 39, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/bin/python -m pip install --upgrade --upgrade-strategy eager --no-cache-dir .
Processing /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/checkouts/latest
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Installing backend dependencies: started
  Installing backend dependencies: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: numpy in /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages (from metropc==1.4.2) (1.24.4)
Collecting scipy (from metropc==1.4.2)
  Downloading scipy-1.10.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (34.5 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 34.5/34.5 MB 151.0 MB/s eta 0:00:00
Collecting xarray (from metropc==1.4.2)
  Downloading xarray-2023.1.0-py3-none-any.whl (973 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 973.1/973.1 kB 219.4 MB/s eta 0:00:00
Collecting msgpack (from metropc==1.4.2)
  Downloading msgpack-1.0.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (322 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 322.4/322.4 kB 200.4 MB/s eta 0:00:00
Collecting pandas>=1.3 (from xarray->metropc==1.4.2)
  Downloading pandas-2.0.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (12.4 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 12.4/12.4 MB 136.3 MB/s eta 0:00:00
Requirement already satisfied: packaging>=21.3 in /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages (from xarray->metropc==1.4.2) (23.1)
Collecting python-dateutil>=2.8.2 (from pandas>=1.3->xarray->metropc==1.4.2)
  Downloading python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 247.7/247.7 kB 198.5 MB/s eta 0:00:00
Requirement already satisfied: pytz>=2020.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages (from pandas>=1.3->xarray->metropc==1.4.2) (2023.3)
Collecting tzdata>=2022.1 (from pandas>=1.3->xarray->metropc==1.4.2)
  Downloading tzdata-2023.3-py2.py3-none-any.whl (341 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 341.8/341.8 kB 179.1 MB/s eta 0:00:00
Requirement already satisfied: six>=1.5 in /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages (from python-dateutil>=2.8.2->pandas>=1.3->xarray->metropc==1.4.2) (1.16.0)
Building wheels for collected packages: metropc
  Building wheel for metropc (pyproject.toml): started
  Building wheel for metropc (pyproject.toml): finished with status 'done'
  Created wheel for metropc: filename=metropc-1.4.2-cp38-cp38-linux_x86_64.whl size=463964 sha256=a6e5d7fce0541af7d185eef401d72672d5729056bc8775c08efc4a5882c3675d
  Stored in directory: /tmp/pip-ephem-wheel-cache-9s8b7o0l/wheels/93/89/74/a2c931ef73a4f221d183a882756e3f0eaeebf1658dd1446c54
Successfully built metropc
Installing collected packages: msgpack, tzdata, scipy, python-dateutil, pandas, xarray, metropc
Successfully installed metropc-1.4.2 msgpack-1.0.5 pandas-2.0.3 python-dateutil-2.8.2 scipy-1.10.1 tzdata-2023.3 xarray-2023.1.0

[rtd-command-info] start-time: 2023-07-13T06:40:44.038898Z, end-time: 2023-07-13T06:40:44.099748Z, duration: 0, exit-code: 0
cat doc/source/conf.py
# Configuration file for the Sphinx documentation builder.
#
# This file only contains a selection of the most common options. For a full
# list see the documentation:
# https://www.sphinx-doc.org/en/master/usage/configuration.html

# -- Path setup --------------------------------------------------------------

# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
# import os
# import sys
# sys.path.insert(0, os.path.abspath('.'))


# -- Project information -----------------------------------------------------

project = 'metropc'
copyright = '2020, Philipp Schmidt'
author = 'Philipp Schmidt'

# The full version, including alpha/beta/rc tags
release = '1.3.0'


# -- General configuration ---------------------------------------------------

# The master toctree document.
master_doc = 'index'

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
    'sphinx.ext.napoleon',
    'sphinx.ext.intersphinx'
]

# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This pattern also affects html_static_path and html_extra_path.
exclude_patterns = []


# -- Options for HTML output -------------------------------------------------

# The theme to use for HTML and HTML Help pages.  See the documentation for
# a list of builtin themes.
#
html_theme = 'sphinx_rtd_theme'

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']




###########################################################################
#          auto-created readthedocs.org specific configuration            #
###########################################################################


#
# The following code was added during an automated build on readthedocs.org
# It is auto created and injected for every build. The result is based on the
# conf.py.tmpl file found in the readthedocs.org codebase:
# https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl
#


import importlib
import sys
import os.path
from six import string_types

from sphinx import version_info

# Get suffix for proper linking to GitHub
# This is deprecated in Sphinx 1.3+,
# as each page can have its own suffix
if globals().get('source_suffix', False):
    if isinstance(source_suffix, string_types):
        SUFFIX = source_suffix
    elif isinstance(source_suffix, (list, tuple)):
        # Sphinx >= 1.3 supports list/tuple to define multiple suffixes
        SUFFIX = source_suffix[0]
    elif isinstance(source_suffix, dict):
        # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes
        SUFFIX = list(source_suffix.keys())[0]  # make a ``list()`` for py2/py3 compatibility
    else:
        # default to .rst
        SUFFIX = '.rst'
else:
    SUFFIX = '.rst'

# Add RTD Static Path. Add to the end because it overwrites previous files.
if not 'html_static_path' in globals():
    html_static_path = []
if os.path.exists('_static'):
    html_static_path.append('_static')

# Add RTD Theme only if they aren't overriding it already
using_rtd_theme = (
    (
        'html_theme' in globals() and
        html_theme in ['default'] and
        # Allow people to bail with a hack of having an html_style
        'html_style' not in globals()
    ) or 'html_theme' not in globals()
)
if using_rtd_theme:
    theme = importlib.import_module('sphinx_rtd_theme')
    html_theme = 'sphinx_rtd_theme'
    html_style = None
    html_theme_options = {}
    if 'html_theme_path' in globals():
        html_theme_path.append(theme.get_html_theme_path())
    else:
        html_theme_path = [theme.get_html_theme_path()]

if globals().get('websupport2_base_url', False):
    websupport2_base_url = 'http://rtd.xfel.eu/websupport'
    websupport2_static_url = '/static/'


#Add project information to the template context.
context = {
    'using_theme': using_rtd_theme,
    'html_theme': html_theme,
    'current_version': "latest",
    'version_slug': "latest",
    'MEDIA_URL': "media/",
    'STATIC_URL': "/static/",
    'PRODUCTION_DOMAIN': "rtd.xfel.eu",
    'versions': [
    ("latest", "/en/latest/"),
    ("preview", "/en/preview/"),
    ("fix-rtd-docs", "/en/fix-rtd-docs/"),
    ],
    'downloads': [ 
    ("pdf", "//rtd.xfel.eu/downloads/metropc/latest/pdf/"),
    ("html", "//rtd.xfel.eu/downloads/metropc/latest/htmlzip/"),
    ("epub", "//rtd.xfel.eu/downloads/metropc/latest/epub/"),
    ],
    'subprojects': [ 
    ],
    'slug': 'metropc',
    'name': u'metropc',
    'rtd_language': u'en',
    'programming_language': u'words',
    'canonical_url': 'http://rtd.xfel.eu/docs/metropc/en/latest/',
    'analytics_code': 'None',
    'single_version': False,
    'conf_py_path': '/doc/source/',
    'api_host': 'http://rtd.xfel.eu',
    'github_user': 'None',
    'proxied_api_host': '/_',
    'github_repo': 'None',
    'github_version': 'master',
    'display_github': False,
    'bitbucket_user': 'None',
    'bitbucket_repo': 'None',
    'bitbucket_version': 'master',
    'display_bitbucket': False,
    'gitlab_user': 'None',
    'gitlab_repo': 'None',
    'gitlab_version': 'master',
    'display_gitlab': False,
    'READTHEDOCS': True,
    'using_theme': (html_theme == "default"),
    'new_theme': (html_theme == "sphinx_rtd_theme"),
    'source_suffix': SUFFIX,
    'ad_free': False,
    'docsearch_disabled': False,
    'user_analytics_code': '',
    'global_analytics_code': 'None',
    'commit': '5c207672',
}




if 'html_context' in globals():
    
    html_context.update(context)
    
else:
    html_context = context

# Add custom RTD extension
if 'extensions' in globals():
    # Insert at the beginning because it can interfere
    # with other extensions.
    # See https://github.com/rtfd/readthedocs.org/pull/4054
    extensions.insert(0, "readthedocs_ext.readthedocs")
else:
    extensions = ["readthedocs_ext.readthedocs"]

# Add External version warning banner to the external version documentation
if 'branch' == 'external':
    extensions.insert(1, "readthedocs_ext.external_version_warning")

project_language = 'en'

# User's Sphinx configurations
language_user = globals().get('language', None)
latex_engine_user = globals().get('latex_engine', None)
latex_elements_user = globals().get('latex_elements', None)

# Remove this once xindy gets installed in Docker image and XINDYOPS
# env variable is supported
# https://github.com/rtfd/readthedocs-docker-images/pull/98
latex_use_xindy = False

chinese = any([
    language_user in ('zh_CN', 'zh_TW'),
    project_language in ('zh_CN', 'zh_TW'),
])

japanese = any([
    language_user == 'ja',
    project_language == 'ja',
])

if chinese:
    latex_engine = latex_engine_user or 'xelatex'

    latex_elements_rtd = {
        'preamble': '\\usepackage[UTF8]{ctex}\n',
    }
    latex_elements = latex_elements_user or latex_elements_rtd
elif japanese:
    latex_engine = latex_engine_user or 'platex'

# Make sure our build directory is always excluded
exclude_patterns = globals().get('exclude_patterns', [])
exclude_patterns.extend(['_build'])

[rtd-command-info] start-time: 2023-07-13T06:40:44.187715Z, end-time: 2023-07-13T06:40:46.494052Z, duration: 2, exit-code: 0
python /usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/bin/sphinx-build -T -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html
Running Sphinx v1.8.6
loading translations [en]... done
making output directory...
building [mo]: targets for 0 po files that are out of date
building [readthedocs]: targets for 7 source files that are out of date
updating environment: 7 added, 0 changed, 0 removed
reading sources... [ 14%] changelog
reading sources... [ 28%] client
reading sources... [ 42%] context
reading sources... [ 57%] frontend
reading sources... [ 71%] index
reading sources... [ 85%] intro
reading sources... [100%] reference

/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/checkouts/latest/doc/source/context.rst:412: WARNING: Error in "attribute" directive:
unknown option: "type".

.. attribute :: ctx
   :type: metropc.core.Context

   Reference to the current :class:`Context` object. This symbol may only be used **outside of views**, in particular in imported modules. Within a view, use the ``internal#context`` path to obtain a reference to the :class:`Context` object.
/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/checkouts/latest/doc/source/context.rst:417: WARNING: Error in "attribute" directive:
unknown option: "type".

.. attribute :: ContextStage
   :type: metropc.ContextStage
/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/checkouts/latest/doc/source/context.rst:420: WARNING: Error in "attribute" directive:
unknown option: "type".

.. attribute :: ViewOutput
   :type: metropc.ViewOutput
/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/checkouts/latest/doc/source/context.rst:423: WARNING: Error in "attribute" directive:
unknown option: "type".

.. attribute :: ViewStage
   :type: metropc.ViewStage
WARNING: autodoc: failed to import class 'SortedVectorView' from module 'metropc.builtin'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages/sphinx/util/inspect.py", line 225, in safe_getattr
    return getattr(obj, name, *defargs)
AttributeError: module 'metropc.builtin' has no attribute 'SortedVectorView'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages/sphinx/ext/autodoc/importer.py", line 193, in import_object
    obj = attrgetter(obj, attrname)
  File "/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages/sphinx/ext/autodoc/__init__.py", line 290, in get_attr
    return autodoc_attrgetter(self.env.app, obj, name, *defargs)
  File "/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages/sphinx/ext/autodoc/__init__.py", line 1563, in autodoc_attrgetter
    return safe_getattr(obj, name, *defargs)
  File "/usr/src/app/checkouts/readthedocs.org/user_builds/metropc/envs/latest/lib/python3.8/site-packages/sphinx/util/inspect.py", line 241, in safe_getattr
    raise AttributeError(name)
AttributeError: SortedVectorView

WARNING: autodoc: failed to import class 'frontend.Context' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import class 'frontend.StageGroup' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import function 'frontend.encode_protocol' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import function 'frontend.decode_protocol' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import class 'frontend.EventBuffer' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import class 'stage.StageRunner' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import class 'stage.ThreadRunner' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import class 'stage.ProcessRunner' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import class 'stage.PoolContext' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import class 'stage.ReduceContext' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import class 'client.IndexEntry' from module 'metropc'; the following exception was raised:
No module named 'zmq'
WARNING: autodoc: failed to import class 'client.IndexViewEntry' from module 'metropc'; the following exception was raised:
No module named 'zmq'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [ 14%] changelog
writing output... [ 28%] client
writing output... [ 42%] context
writing output... [ 57%] frontend
writing output... [ 71%] index
writing output... [ 85%] intro
writing output... [100%] reference

generating indices... genindex py-modindex
writing additional pages... search
copying images... [ 50%] _static/view_graph.png
copying images... [100%] _static/pipeline_stages.png

copying static files... done
copying readthedocs static files... done
copying searchtools... done
copying extra files... done
dumping search index in English (code: en) ... done
dumping object inventory... done
build succeeded, 17 warnings.

The HTML pages are in _build/html.