Read the Docs build information Build id: 27552 Project: european-xfel-offline-calibration Version: latest Commit: 017f4bdce517acebedda1d8db5c1340789d3b5c1 Date: 2024-02-06T09:48:00.332652Z State: finished Success: True [rtd-command-info] start-time: 2024-02-06T09:51:03.124968Z, end-time: 2024-02-06T09:51:23.559329Z, duration: 20, exit-code: 0 git clone --no-single-branch --depth 50 http://git.xfel.eu/calibration/pycalibration . Cloning into '.'... warning: redirecting to https://git.xfel.eu/calibration/pycalibration.git/ [rtd-command-info] start-time: 2024-02-06T09:51:23.909939Z, end-time: 2024-02-06T09:51:24.735615Z, duration: 0, exit-code: 0 git checkout --force origin/master Note: checking out 'origin/master'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 017f4bdc Merge branch 'fix/one_pulse_in_list' into 'master' [rtd-command-info] start-time: 2024-02-06T09:51:24.823437Z, end-time: 2024-02-06T09:51:24.894593Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2024-02-06T09:51:26.862398Z, end-time: 2024-02-06T09:51:32.043014Z, duration: 5, exit-code: 0 python3.8 -mvirtualenv /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest Using base prefix '/home/docs/.pyenv/versions/3.8.0' New python executable in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python3.8 Also creating executable in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2024-02-06T09:51:32.136206Z, end-time: 2024-02-06T09:51:33.103928Z, duration: 0, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python -m pip install --upgrade --no-cache-dir pip Requirement already satisfied: pip in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (24.0) [rtd-command-info] start-time: 2024-02-06T09:51:33.198582Z, end-time: 2024-02-06T09:52:02.766806Z, duration: 29, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python -m pip install --upgrade --no-cache-dir jinja2==2.11.3 markupsafe==2.0.1 Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 mkdocs<1.1 Collecting jinja2==2.11.3 Downloading Jinja2-2.11.3-py2.py3-none-any.whl (125 kB) 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wheel for pillow: filename=Pillow-5.4.1-cp38-cp38-linux_x86_64.whl size=1262521 sha256=658752b038c691d9d646cca643a24045b965969e3b27b85c1f5de633cb93aafc Stored in directory: /tmp/pip-ephem-wheel-cache-arj64g88/wheels/5f/a8/6b/5b7b3f764d879214eb03570f74d2b086201eb514e6ffa68d6d Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.3-py3-none-any.whl size=492024 sha256=915452f94622c4230121637211640384dbd615bd800cc979c233e9cd3ca48820 Stored in directory: /tmp/pip-ephem-wheel-cache-arj64g88/wheels/a0/0b/ee/e6994fadb42c1354dcccb139b0bf2795271bddfe6253ccdf11 Successfully built mock pillow future Installing collected packages: snowballstemmer, pytz, Pygments, mock, docutils, zipp, urllib3, tornado, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, six, setuptools, PyYAML, pillow, packaging, markupsafe, imagesize, idna, future, click, charset-normalizer, certifi, babel, alabaster, requests, livereload, jinja2, importlib-metadata, commonmark, sphinx, Markdown, recommonmark, mkdocs Attempting uninstall: setuptools Found existing installation: setuptools 69.0.3 Uninstalling setuptools-69.0.3: Successfully uninstalled setuptools-69.0.3 Successfully installed Markdown-3.5.2 PyYAML-6.0.1 Pygments-2.3.1 alabaster-0.7.13 babel-2.14.0 certifi-2024.2.2 charset-normalizer-3.3.2 click-8.1.7 commonmark-0.8.1 docutils-0.14 future-0.18.3 idna-3.6 imagesize-1.4.1 importlib-metadata-7.0.1 jinja2-2.11.3 livereload-2.6.3 markupsafe-2.0.1 mkdocs-1.0.4 mock-1.0.1 packaging-23.2 pillow-5.4.1 pytz-2024.1 recommonmark-0.5.0 requests-2.31.0 setuptools-41.0.1 six-1.16.0 snowballstemmer-2.2.0 sphinx-5.1.1 sphinxcontrib-applehelp-1.0.4 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.1 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.3 sphinxcontrib-serializinghtml-1.1.5 tornado-6.4 urllib3-2.2.0 zipp-3.17.0 [rtd-command-info] start-time: 2024-02-06T09:52:02.858190Z, end-time: 2024-02-06T09:52:32.720614Z, duration: 29, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt Collecting mkdocs==1.4.2 (from -r docs/requirements.txt (line 1)) Downloading mkdocs-1.4.2-py3-none-any.whl (3.7 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.7/3.7 MB 30.2 MB/s eta 0:00:00 Collecting mkdocs-material==9.0.15 (from -r docs/requirements.txt (line 2)) Downloading mkdocs_material-9.0.15-py3-none-any.whl (7.7 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.7/7.7 MB 139.4 MB/s eta 0:00:00 Collecting mkdocstrings==0.19 (from mkdocstrings[python]==0.19->-r docs/requirements.txt (line 3)) Downloading mkdocstrings-0.19.0-py3-none-any.whl (25 kB) Collecting mkdocs-glightbox (from -r docs/requirements.txt (line 4)) Downloading 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Stored in directory: /tmp/pip-ephem-wheel-cache-9vbbapip/wheels/56/27/09/2113947d506c30867dbf5b5ab09a5434c50757a976e6ac2f1f Successfully built mkdocs-redirects Installing collected packages: webencodings, wcwidth, pure-eval, ptyprocess, pickleshare, mkdocs-glightbox, json5, fastjsonschema, backcall, widgetsnbextension, websocket-client, webcolors, watchdog, uri-template, typing-extensions, types-python-dateutil, traitlets, tomli, tinycss2, terminado, soupsieve, sniffio, send2trash, rpds-py, rfc3986-validator, rfc3339-validator, regex, qtpy, pyzmq, pyyaml-env-tag, python-json-logger, python-dateutil, pygments, pycparser, psutil, prompt-toolkit, prometheus-client, platformdirs, pkgutil-resolve-name, pexpect, parso, pandocfilters, overrides, nest-asyncio, mkdocs-material-extensions, mistune, mergedeep, jupyterlab-widgets, jupyterlab-pygments, jsonpointer, jinja2, importlib-resources, h11, fqdn, executing, exceptiongroup, defusedxml, decorator, debugpy, colorama, bleach, attrs, asttokens, stack-data, referencing, matplotlib-inline, markdown, jupyter-server-terminals, jupyter-core, jedi, httpcore, griffe, ghp-import, comm, cffi, beautifulsoup4, async-lru, arrow, anyio, pymdown-extensions, mkdocs, jupyter-client, jsonschema-specifications, isoduration, ipython, httpx, argon2-cffi-bindings, mkdocs-section-index, mkdocs-redirects, mkdocs-material, mkdocs-literate-nav, mkdocs-gen-files, mkdocs-autorefs, jsonschema, ipywidgets, ipykernel, argon2-cffi, qtconsole, nbformat, mkdocstrings, jupyter-console, nbclient, mkdocstrings-python, jupyter-events, nbconvert, jupyter-server, notebook-shim, jupyterlab-server, jupyter-lsp, jupyterlab, notebook, jupyter Attempting uninstall: pygments Found existing installation: Pygments 2.3.1 Uninstalling Pygments-2.3.1: Successfully uninstalled Pygments-2.3.1 Attempting uninstall: jinja2 Found existing installation: Jinja2 2.11.3 Uninstalling Jinja2-2.11.3: Successfully uninstalled Jinja2-2.11.3 Attempting uninstall: markdown Found existing installation: Markdown 3.5.2 Uninstalling Markdown-3.5.2: Successfully uninstalled Markdown-3.5.2 Attempting uninstall: mkdocs Found existing installation: mkdocs 1.0.4 Uninstalling mkdocs-1.0.4: Successfully uninstalled mkdocs-1.0.4 Successfully installed anyio-4.2.0 argon2-cffi-23.1.0 argon2-cffi-bindings-21.2.0 arrow-1.3.0 asttokens-2.4.1 async-lru-2.0.4 attrs-23.2.0 backcall-0.2.0 beautifulsoup4-4.12.3 bleach-6.1.0 cffi-1.16.0 colorama-0.4.6 comm-0.2.1 debugpy-1.8.0 decorator-5.1.1 defusedxml-0.7.1 exceptiongroup-1.2.0 executing-2.0.1 fastjsonschema-2.19.1 fqdn-1.5.1 ghp-import-2.1.0 griffe-0.27.1 h11-0.14.0 httpcore-1.0.2 httpx-0.26.0 importlib-resources-6.1.1 ipykernel-6.29.1 ipython-8.12.3 ipywidgets-8.1.1 isoduration-20.11.0 jedi-0.19.1 jinja2-3.1.3 json5-0.9.14 jsonpointer-2.4 jsonschema-4.21.1 jsonschema-specifications-2023.12.1 jupyter-1.0.0 jupyter-client-8.6.0 jupyter-console-6.6.3 jupyter-core-5.7.1 jupyter-events-0.9.0 jupyter-lsp-2.2.2 jupyter-server-2.12.5 jupyter-server-terminals-0.5.2 jupyterlab-4.1.0 jupyterlab-pygments-0.3.0 jupyterlab-server-2.25.2 jupyterlab-widgets-3.0.9 markdown-3.3.7 matplotlib-inline-0.1.6 mergedeep-1.3.4 mistune-3.0.2 mkdocs-1.4.2 mkdocs-autorefs-0.5.0 mkdocs-gen-files-0.4.0 mkdocs-glightbox-0.3.7 mkdocs-literate-nav-0.5.0 mkdocs-material-9.0.15 mkdocs-material-extensions-1.3.1 mkdocs-redirects-1.2.0 mkdocs-section-index-0.3.5 mkdocstrings-0.19.0 mkdocstrings-python-0.8.3 nbclient-0.9.0 nbconvert-7.15.0 nbformat-5.9.2 nest-asyncio-1.6.0 notebook-7.0.7 notebook-shim-0.2.3 overrides-7.7.0 pandocfilters-1.5.1 parso-0.8.3 pexpect-4.9.0 pickleshare-0.7.5 pkgutil-resolve-name-1.3.10 platformdirs-4.2.0 prometheus-client-0.19.0 prompt-toolkit-3.0.43 psutil-5.9.8 ptyprocess-0.7.0 pure-eval-0.2.2 pycparser-2.21 pygments-2.17.2 pymdown-extensions-10.4 python-dateutil-2.8.2 python-json-logger-2.0.7 pyyaml-env-tag-0.1 pyzmq-25.1.2 qtconsole-5.5.1 qtpy-2.4.1 referencing-0.33.0 regex-2023.12.25 rfc3339-validator-0.1.4 rfc3986-validator-0.1.1 rpds-py-0.17.1 send2trash-1.8.2 sniffio-1.3.0 soupsieve-2.5 stack-data-0.6.3 terminado-0.18.0 tinycss2-1.2.1 tomli-2.0.1 traitlets-5.14.1 types-python-dateutil-2.8.19.20240106 typing-extensions-4.9.0 uri-template-1.3.0 watchdog-3.0.0 wcwidth-0.2.13 webcolors-1.13 webencodings-0.5.1 websocket-client-1.7.0 widgetsnbextension-4.0.9 [rtd-command-info] start-time: 2024-02-06T09:52:32.822996Z, end-time: 2024-02-06T09:53:40.198808Z, duration: 67, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python -m pip install --upgrade --upgrade-strategy eager --no-cache-dir . Processing /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/checkouts/latest Installing build dependencies: started Installing build dependencies: finished with status 'done' Getting requirements to build wheel: started Getting requirements to build wheel: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Collecting Cython==0.29.21 (from European-XFEL-Offline-Calibration==1.0) Downloading Cython-0.29.21-cp38-cp38-manylinux1_x86_64.whl (1.9 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.9/1.9 MB 19.3 MB/s eta 0:00:00 Collecting Jinja2==2.11.2 (from European-XFEL-Offline-Calibration==1.0) Downloading Jinja2-2.11.2-py2.py3-none-any.whl (125 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 125.8/125.8 kB 178.0 MB/s eta 0:00:00 Requirement already satisfied: markupsafe==2.0.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from European-XFEL-Offline-Calibration==1.0) (2.0.1) Collecting astcheck==0.3.0 (from European-XFEL-Offline-Calibration==1.0) Downloading astcheck-0.3.0-py3-none-any.whl (4.9 kB) Collecting cfelpyutils==2.0.6 (from European-XFEL-Offline-Calibration==1.0) Downloading cfelpyutils-2.0.6-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (511 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 511.2/511.2 kB 208.9 MB/s eta 0:00:00 Collecting calibration-client==11.2.0 (from European-XFEL-Offline-Calibration==1.0) Downloading calibration_client-11.2.0-py3-none-any.whl (80 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 80.4/80.4 kB 173.7 MB/s eta 0:00:00 Collecting dill==0.3.0 (from European-XFEL-Offline-Calibration==1.0) Downloading dill-0.3.0.tar.gz (151 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 151.4/151.4 kB 170.5 MB/s eta 0:00:00 Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting docutils==0.17.1 (from European-XFEL-Offline-Calibration==1.0) Downloading docutils-0.17.1-py2.py3-none-any.whl (575 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 575.5/575.5 kB 192.4 MB/s eta 0:00:00 Collecting dynaconf==3.1.4 (from European-XFEL-Offline-Calibration==1.0) Downloading dynaconf-3.1.4-py2.py3-none-any.whl (197 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 197.5/197.5 kB 165.2 MB/s eta 0:00:00 Collecting env-cache==0.1 (from European-XFEL-Offline-Calibration==1.0) Downloading env_cache-0.1-py2.py3-none-any.whl (4.7 kB) Collecting extra-data==1.15.1 (from European-XFEL-Offline-Calibration==1.0) Downloading EXtra_data-1.15.1-py3-none-any.whl.metadata (3.3 kB) Collecting extra-geom==1.10.0 (from European-XFEL-Offline-Calibration==1.0) Downloading EXtra_geom-1.10.0-py3-none-any.whl (87 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 87.7/87.7 kB 170.7 MB/s eta 0:00:00 Collecting gitpython==3.1.0 (from European-XFEL-Offline-Calibration==1.0) Downloading GitPython-3.1.0-py3-none-any.whl (450 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 450.7/450.7 kB 203.2 MB/s eta 0:00:00 Collecting h5py==3.5.0 (from European-XFEL-Offline-Calibration==1.0) Downloading h5py-3.5.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (4.5 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.5/4.5 MB 112.2 MB/s eta 0:00:00 Collecting iminuit==1.3.8 (from European-XFEL-Offline-Calibration==1.0) Downloading iminuit-1.3.8-cp38-cp38-manylinux2010_x86_64.whl (4.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.3/4.3 MB 123.1 MB/s eta 0:00:00 Collecting ipykernel==5.1.4 (from European-XFEL-Offline-Calibration==1.0) Downloading ipykernel-5.1.4-py3-none-any.whl (116 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 116.8/116.8 kB 165.1 MB/s eta 0:00:00 Collecting ipyparallel==6.2.4 (from European-XFEL-Offline-Calibration==1.0) Downloading ipyparallel-6.2.4-py2.py3-none-any.whl (198 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 198.6/198.6 kB 178.1 MB/s eta 0:00:00 Collecting ipython==7.12.0 (from European-XFEL-Offline-Calibration==1.0) Downloading ipython-7.12.0-py3-none-any.whl (777 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 777.3/777.3 kB 204.8 MB/s eta 0:00:00 Collecting ipython-genutils==0.2.0 (from European-XFEL-Offline-Calibration==1.0) Downloading ipython_genutils-0.2.0-py2.py3-none-any.whl (26 kB) Collecting jupyter-core==4.10.0 (from European-XFEL-Offline-Calibration==1.0) Downloading jupyter_core-4.10.0-py3-none-any.whl (87 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 87.3/87.3 kB 176.6 MB/s eta 0:00:00 Collecting jupyter-client==7.3.4 (from European-XFEL-Offline-Calibration==1.0) Downloading jupyter_client-7.3.4-py3-none-any.whl (132 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 132.1/132.1 kB 194.7 MB/s eta 0:00:00 Collecting jupyter-console==6.1.0 (from European-XFEL-Offline-Calibration==1.0) Downloading jupyter_console-6.1.0-py2.py3-none-any.whl (21 kB) Collecting kafka-python==2.0.2 (from European-XFEL-Offline-Calibration==1.0) Downloading kafka_python-2.0.2-py2.py3-none-any.whl (246 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 246.5/246.5 kB 187.1 MB/s eta 0:00:00 Collecting lxml==4.5.0 (from European-XFEL-Offline-Calibration==1.0) Downloading lxml-4.5.0-cp38-cp38-manylinux1_x86_64.whl (5.6 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 5.6/5.6 MB 146.5 MB/s eta 0:00:00 Collecting matplotlib==3.4.2 (from European-XFEL-Offline-Calibration==1.0) Downloading matplotlib-3.4.2-cp38-cp38-manylinux1_x86_64.whl (10.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.3/10.3 MB 125.2 MB/s eta 0:00:00 Collecting metadata-client==4.0.0 (from European-XFEL-Offline-Calibration==1.0) Downloading metadata_client-4.0.0-py3-none-any.whl.metadata (15 kB) Collecting nbclient==0.5.1 (from European-XFEL-Offline-Calibration==1.0) Downloading nbclient-0.5.1-py3-none-any.whl (65 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 65.7/65.7 kB 156.4 MB/s eta 0:00:00 Collecting nbconvert==5.6.1 (from European-XFEL-Offline-Calibration==1.0) Downloading nbconvert-5.6.1-py2.py3-none-any.whl (455 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 455.1/455.1 kB 199.9 MB/s eta 0:00:00 Collecting nbformat==5.0.7 (from European-XFEL-Offline-Calibration==1.0) Downloading nbformat-5.0.7-py3-none-any.whl (170 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 170.6/170.6 kB 169.9 MB/s eta 0:00:00 Collecting nbparameterise==0.6 (from European-XFEL-Offline-Calibration==1.0) Downloading nbparameterise-0.6-py3-none-any.whl (7.7 kB) Collecting notebook==6.1.5 (from European-XFEL-Offline-Calibration==1.0) Downloading notebook-6.1.5-py3-none-any.whl (9.5 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 9.5/9.5 MB 146.0 MB/s eta 0:00:00 Collecting numpy==1.20.3 (from European-XFEL-Offline-Calibration==1.0) Downloading numpy-1.20.3-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (15.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 15.4/15.4 MB 130.8 MB/s eta 0:00:00 Collecting pasha==0.1.1 (from European-XFEL-Offline-Calibration==1.0) Downloading pasha-0.1.1-py3-none-any.whl (11 kB) Collecting prettytable==0.7.2 (from European-XFEL-Offline-Calibration==1.0) Downloading prettytable-0.7.2.zip (28 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting princess==0.5 (from European-XFEL-Offline-Calibration==1.0) Downloading princess-0.5-py3-none-any.whl (4.2 kB) Collecting pypandoc==1.4 (from European-XFEL-Offline-Calibration==1.0) Downloading pypandoc-1.4.tar.gz (27 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Requirement already satisfied: python-dateutil==2.8.2 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from European-XFEL-Offline-Calibration==1.0) (2.8.2) Collecting pyyaml==5.3 (from European-XFEL-Offline-Calibration==1.0) Downloading PyYAML-5.3.tar.gz (268 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 268.2/268.2 kB 180.5 MB/s eta 0:00:00 Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting pyzmq==23.2.0 (from European-XFEL-Offline-Calibration==1.0) Downloading pyzmq-23.2.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (1.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.1/1.1 MB 213.5 MB/s eta 0:00:00 Collecting requests==2.22.0 (from European-XFEL-Offline-Calibration==1.0) Downloading requests-2.22.0-py2.py3-none-any.whl (57 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 58.0/58.0 kB 158.0 MB/s eta 0:00:00 Collecting scikit-learn==0.22.2.post1 (from European-XFEL-Offline-Calibration==1.0) Downloading scikit_learn-0.22.2.post1-cp38-cp38-manylinux1_x86_64.whl (7.0 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.0/7.0 MB 147.9 MB/s eta 0:00:00 Collecting scipy==1.7.0 (from European-XFEL-Offline-Calibration==1.0) Downloading scipy-1.7.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (28.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 28.4/28.4 MB 120.2 MB/s eta 0:00:00 Collecting sharedmem==0.3.8 (from European-XFEL-Offline-Calibration==1.0) Downloading sharedmem-0.3.8.tar.gz (17 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting sphinx==1.8.5 (from European-XFEL-Offline-Calibration==1.0) Downloading Sphinx-1.8.5-py2.py3-none-any.whl (3.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.1/3.1 MB 181.3 MB/s eta 0:00:00 Collecting tabulate==0.8.6 (from European-XFEL-Offline-Calibration==1.0) Downloading tabulate-0.8.6.tar.gz (45 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 45.5/45.5 kB 101.9 MB/s eta 0:00:00 Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting traitlets==4.3.3 (from European-XFEL-Offline-Calibration==1.0) Downloading traitlets-4.3.3-py2.py3-none-any.whl (75 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 75.7/75.7 kB 141.8 MB/s eta 0:00:00 Collecting xarray==2022.3.0 (from European-XFEL-Offline-Calibration==1.0) Downloading xarray-2022.3.0-py3-none-any.whl (870 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 870.9/870.9 kB 194.8 MB/s eta 0:00:00 Collecting EXtra-redu==0.0.8 (from European-XFEL-Offline-Calibration==1.0) Downloading EXtra_redu-0.0.8-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (461 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 461.0/461.0 kB 203.0 MB/s eta 0:00:00 Collecting rich==12.6.0 (from European-XFEL-Offline-Calibration==1.0) Downloading rich-12.6.0-py3-none-any.whl (237 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 237.5/237.5 kB 191.9 MB/s eta 0:00:00 Collecting httpx==0.23.0 (from European-XFEL-Offline-Calibration==1.0) Downloading httpx-0.23.0-py3-none-any.whl (84 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 84.8/84.8 kB 153.2 MB/s eta 0:00:00 Collecting oauth2-xfel-client>=6.1 (from calibration-client==11.2.0->European-XFEL-Offline-Calibration==1.0) Downloading oauth2_xfel_client-6.1.1-py3-none-any.whl (9.8 kB) Collecting oauthlib (from calibration-client==11.2.0->European-XFEL-Offline-Calibration==1.0) Downloading oauthlib-3.2.2-py3-none-any.whl (151 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 151.7/151.7 kB 192.9 MB/s eta 0:00:00 Requirement already satisfied: pytz in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from calibration-client==11.2.0->European-XFEL-Offline-Calibration==1.0) (2024.1) Collecting requests-oauthlib (from calibration-client==11.2.0->European-XFEL-Offline-Calibration==1.0) Downloading requests_oauthlib-1.3.1-py2.py3-none-any.whl (23 kB) Collecting mypy-extensions>=0.4.3 (from cfelpyutils==2.0.6->European-XFEL-Offline-Calibration==1.0) Downloading mypy_extensions-1.0.0-py3-none-any.whl (4.7 kB) Collecting pandas>=1.1.5 (from cfelpyutils==2.0.6->European-XFEL-Offline-Calibration==1.0) Downloading pandas-2.0.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (18 kB) Requirement already satisfied: packaging in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from extra-data==1.15.1->European-XFEL-Offline-Calibration==1.0) (23.2) Collecting euxfel-bunch-pattern>=0.6 (from EXtra-redu==0.0.8->European-XFEL-Offline-Calibration==1.0) Downloading euxfel_bunch_pattern-0.6-py3-none-any.whl (5.3 kB) Collecting gitdb<5,>=4.0.1 (from gitpython==3.1.0->European-XFEL-Offline-Calibration==1.0) Downloading gitdb-4.0.11-py3-none-any.whl.metadata (1.2 kB) Requirement already satisfied: certifi in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from httpx==0.23.0->European-XFEL-Offline-Calibration==1.0) (2024.2.2) Requirement already satisfied: sniffio in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from httpx==0.23.0->European-XFEL-Offline-Calibration==1.0) (1.3.0) Collecting rfc3986<2,>=1.3 (from rfc3986[idna2008]<2,>=1.3->httpx==0.23.0->European-XFEL-Offline-Calibration==1.0) Downloading rfc3986-1.5.0-py2.py3-none-any.whl (31 kB) Collecting httpcore<0.16.0,>=0.15.0 (from httpx==0.23.0->European-XFEL-Offline-Calibration==1.0) Downloading httpcore-0.15.0-py3-none-any.whl (68 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 68.4/68.4 kB 163.4 MB/s eta 0:00:00 Requirement already satisfied: tornado>=4.2 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipykernel==5.1.4->European-XFEL-Offline-Calibration==1.0) (6.4) Requirement already satisfied: decorator in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipyparallel==6.2.4->European-XFEL-Offline-Calibration==1.0) (5.1.1) Requirement already satisfied: setuptools>=18.5 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (41.0.1) Collecting setuptools>=18.5 (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) Downloading setuptools-69.0.3-py3-none-any.whl.metadata (6.3 kB) Requirement already satisfied: jedi>=0.10 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (0.19.1) Requirement already satisfied: pickleshare in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (0.7.5) Requirement already satisfied: prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (3.0.43) Requirement already satisfied: pygments in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (2.17.2) Requirement already satisfied: backcall in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (0.2.0) Requirement already satisfied: pexpect in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (4.9.0) Collecting entrypoints (from jupyter-client==7.3.4->European-XFEL-Offline-Calibration==1.0) Downloading entrypoints-0.4-py3-none-any.whl (5.3 kB) Requirement already satisfied: nest-asyncio>=1.5.4 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from jupyter-client==7.3.4->European-XFEL-Offline-Calibration==1.0) (1.6.0) Collecting cycler>=0.10 (from matplotlib==3.4.2->European-XFEL-Offline-Calibration==1.0) Downloading cycler-0.12.1-py3-none-any.whl.metadata (3.8 kB) Collecting kiwisolver>=1.0.1 (from matplotlib==3.4.2->European-XFEL-Offline-Calibration==1.0) Downloading kiwisolver-1.4.5-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (6.4 kB) Collecting pillow>=6.2.0 (from matplotlib==3.4.2->European-XFEL-Offline-Calibration==1.0) Downloading pillow-10.2.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.7 kB) Collecting pyparsing>=2.2.1 (from matplotlib==3.4.2->European-XFEL-Offline-Calibration==1.0) Downloading pyparsing-3.1.1-py3-none-any.whl.metadata (5.1 kB) Collecting async-generator (from nbclient==0.5.1->European-XFEL-Offline-Calibration==1.0) Downloading async_generator-1.10-py3-none-any.whl (18 kB) Collecting mistune<2,>=0.8.1 (from nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) Downloading mistune-0.8.4-py2.py3-none-any.whl (16 kB) Requirement already satisfied: bleach in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) (6.1.0) Requirement already satisfied: pandocfilters>=1.4.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) (1.5.1) Collecting testpath (from nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) Downloading testpath-0.6.0-py3-none-any.whl (83 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 83.9/83.9 kB 166.3 MB/s eta 0:00:00 Requirement already satisfied: defusedxml in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) (0.7.1) Requirement already satisfied: jsonschema!=2.5.0,>=2.4 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (4.21.1) Requirement already satisfied: argon2-cffi in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from notebook==6.1.5->European-XFEL-Offline-Calibration==1.0) (23.1.0) Requirement already satisfied: Send2Trash in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from notebook==6.1.5->European-XFEL-Offline-Calibration==1.0) (1.8.2) Requirement already satisfied: terminado>=0.8.3 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from notebook==6.1.5->European-XFEL-Offline-Calibration==1.0) (0.18.0) Requirement already satisfied: prometheus-client in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from notebook==6.1.5->European-XFEL-Offline-Calibration==1.0) (0.19.0) Requirement already satisfied: pip>=8.1.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from pypandoc==1.4->European-XFEL-Offline-Calibration==1.0) (24.0) Requirement already satisfied: wheel>=0.25.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from pypandoc==1.4->European-XFEL-Offline-Calibration==1.0) (0.42.0) Requirement already satisfied: six>=1.5 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from python-dateutil==2.8.2->European-XFEL-Offline-Calibration==1.0) (1.16.0) Collecting chardet<3.1.0,>=3.0.2 (from requests==2.22.0->European-XFEL-Offline-Calibration==1.0) Downloading chardet-3.0.4-py2.py3-none-any.whl (133 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 133.4/133.4 kB 160.5 MB/s eta 0:00:00 Collecting idna<2.9,>=2.5 (from requests==2.22.0->European-XFEL-Offline-Calibration==1.0) Downloading idna-2.8-py2.py3-none-any.whl (58 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 58.6/58.6 kB 96.6 MB/s eta 0:00:00 Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 (from requests==2.22.0->European-XFEL-Offline-Calibration==1.0) Downloading urllib3-1.25.11-py2.py3-none-any.whl (127 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 128.0/128.0 kB 186.6 MB/s eta 0:00:00 Collecting commonmark<0.10.0,>=0.9.0 (from rich==12.6.0->European-XFEL-Offline-Calibration==1.0) Downloading commonmark-0.9.1-py2.py3-none-any.whl (51 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 51.1/51.1 kB 155.3 MB/s eta 0:00:00 Requirement already satisfied: typing-extensions<5.0,>=4.0.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from rich==12.6.0->European-XFEL-Offline-Calibration==1.0) (4.9.0) Collecting joblib>=0.11 (from scikit-learn==0.22.2.post1->European-XFEL-Offline-Calibration==1.0) Downloading joblib-1.3.2-py3-none-any.whl.metadata (5.4 kB) Requirement already satisfied: snowballstemmer>=1.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (2.2.0) Requirement already satisfied: babel!=2.0,>=1.3 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (2.14.0) Requirement already satisfied: alabaster<0.8,>=0.7 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (0.7.13) Requirement already satisfied: imagesize in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (1.4.1) Collecting sphinxcontrib-websupport (from sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) Downloading sphinxcontrib_websupport-1.2.4-py2.py3-none-any.whl (39 kB) Collecting smmap<6,>=3.0.1 (from gitdb<5,>=4.0.1->gitpython==3.1.0->European-XFEL-Offline-Calibration==1.0) Downloading smmap-5.0.1-py3-none-any.whl.metadata (4.3 kB) Collecting h11<0.13,>=0.11 (from httpcore<0.16.0,>=0.15.0->httpx==0.23.0->European-XFEL-Offline-Calibration==1.0) Downloading h11-0.12.0-py3-none-any.whl (54 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 54.9/54.9 kB 147.0 MB/s eta 0:00:00 Collecting anyio==3.* (from httpcore<0.16.0,>=0.15.0->httpx==0.23.0->European-XFEL-Offline-Calibration==1.0) Downloading anyio-3.7.1-py3-none-any.whl.metadata (4.7 kB) Requirement already satisfied: exceptiongroup in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from anyio==3.*->httpcore<0.16.0,>=0.15.0->httpx==0.23.0->European-XFEL-Offline-Calibration==1.0) (1.2.0) Requirement already satisfied: parso<0.9.0,>=0.8.3 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from jedi>=0.10->ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (0.8.3) Requirement already satisfied: attrs>=22.2.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from jsonschema!=2.5.0,>=2.4->nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (23.2.0) Requirement already satisfied: importlib-resources>=1.4.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from jsonschema!=2.5.0,>=2.4->nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (6.1.1) Requirement already satisfied: jsonschema-specifications>=2023.03.6 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from jsonschema!=2.5.0,>=2.4->nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (2023.12.1) Requirement already satisfied: pkgutil-resolve-name>=1.3.10 in 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/usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0->ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (0.2.13) Requirement already satisfied: ptyprocess in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from terminado>=0.8.3->notebook==6.1.5->European-XFEL-Offline-Calibration==1.0) (0.7.0) Requirement already satisfied: argon2-cffi-bindings in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from argon2-cffi->notebook==6.1.5->European-XFEL-Offline-Calibration==1.0) (21.2.0) Requirement already satisfied: webencodings in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from bleach->nbconvert==5.6.1->European-XFEL-Offline-Calibration==1.0) (0.5.1) Requirement already satisfied: sphinxcontrib-serializinghtml in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from sphinxcontrib-websupport->sphinx==1.8.5->European-XFEL-Offline-Calibration==1.0) (1.1.5) Requirement already satisfied: zipp>=3.1.0 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from importlib-resources>=1.4.0->jsonschema!=2.5.0,>=2.4->nbformat==5.0.7->European-XFEL-Offline-Calibration==1.0) (3.17.0) Requirement already satisfied: cffi>=1.0.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from argon2-cffi-bindings->argon2-cffi->notebook==6.1.5->European-XFEL-Offline-Calibration==1.0) (1.16.0) Requirement already satisfied: pycparser in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from cffi>=1.0.1->argon2-cffi-bindings->argon2-cffi->notebook==6.1.5->European-XFEL-Offline-Calibration==1.0) (2.21) Downloading EXtra_data-1.15.1-py3-none-any.whl (156 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 156.5/156.5 kB 169.8 MB/s eta 0:00:00 Downloading metadata_client-4.0.0-py3-none-any.whl (125 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 125.7/125.7 kB 180.8 MB/s eta 0:00:00 Downloading cycler-0.12.1-py3-none-any.whl (8.3 kB) Downloading gitdb-4.0.11-py3-none-any.whl (62 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 62.7/62.7 kB 149.8 MB/s eta 0:00:00 Downloading anyio-3.7.1-py3-none-any.whl (80 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 80.9/80.9 kB 167.5 MB/s eta 0:00:00 Downloading joblib-1.3.2-py3-none-any.whl (302 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 302.2/302.2 kB 195.4 MB/s eta 0:00:00 Downloading kiwisolver-1.4.5-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (1.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 196.3 MB/s eta 0:00:00 Downloading pandas-2.0.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (12.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 12.4/12.4 MB 115.4 MB/s eta 0:00:00 Downloading pillow-10.2.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.4/4.4 MB 103.2 MB/s eta 0:00:00 Downloading pyparsing-3.1.1-py3-none-any.whl (103 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 103.1/103.1 kB 186.3 MB/s eta 0:00:00 Downloading setuptools-69.0.3-py3-none-any.whl (819 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 819.5/819.5 kB 203.8 MB/s eta 0:00:00 Downloading smmap-5.0.1-py3-none-any.whl (24 kB) Downloading tzdata-2023.4-py2.py3-none-any.whl (346 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 346.6/346.6 kB 180.5 MB/s eta 0:00:00 Building wheels for collected packages: European-XFEL-Offline-Calibration, dill, prettytable, pypandoc, pyyaml, sharedmem, tabulate Building wheel for European-XFEL-Offline-Calibration (pyproject.toml): started Building wheel for European-XFEL-Offline-Calibration (pyproject.toml): finished with status 'done' Created wheel for European-XFEL-Offline-Calibration: filename=European_XFEL_Offline_Calibration-1.0-cp38-cp38-linux_x86_64.whl size=1639718 sha256=8881714f48fd7f4ee12600109eeb4949478ef00e6439a4939ac29e1798274bd3 Stored in directory: /tmp/pip-ephem-wheel-cache-00r55088/wheels/22/7d/09/eb4f2a2bc8741186a0b6a6c96994f65acdd8e2af144db3f698 Building wheel for dill (setup.py): started Building wheel for dill (setup.py): finished with status 'done' Created wheel for dill: filename=dill-0.3.0-py3-none-any.whl size=77508 sha256=5db0e9d71143ead5bbc451525a2d0947ec93d4b7c6eb7063e2bf565fb333804b Stored in directory: /tmp/pip-ephem-wheel-cache-00r55088/wheels/ec/e7/fb/9b59e2dbda9eeefab51f7cb41df434ff463c4afe1985abff24 Building wheel for prettytable (setup.py): started Building wheel for prettytable (setup.py): finished with status 'done' Created wheel for prettytable: filename=prettytable-0.7.2-py3-none-any.whl size=13699 sha256=48549529b3ccb0b1d6d2da61ee6e92ef6149c2acd189af70e438735ec19dd831 Stored in directory: /tmp/pip-ephem-wheel-cache-00r55088/wheels/48/6d/77/9517cb933af254f51a446f1a5ec9c2be3e45f17384940bce68 Building wheel for pypandoc (setup.py): started Building wheel for pypandoc (setup.py): finished with status 'done' Created wheel for pypandoc: filename=pypandoc-1.4-py3-none-any.whl size=16714 sha256=ff87ee63ee21aa28268204aef883ab785b170fff4c3941b7aacd2ed0ab792ff4 Stored in directory: /tmp/pip-ephem-wheel-cache-00r55088/wheels/f7/d9/a0/ef1fe56c058e41d6271a4935caaeae89d43e2280504690a329 Building wheel for pyyaml (setup.py): started Building wheel for pyyaml (setup.py): finished with status 'done' Created wheel for pyyaml: filename=PyYAML-5.3-cp38-cp38-linux_x86_64.whl size=44227 sha256=885804d0eeced40bf3373733f604ce9f4039d2b859936182b3e352fc5ed005f0 Stored in directory: /tmp/pip-ephem-wheel-cache-00r55088/wheels/e4/94/ec/65e430f66fda7a86c08f61ce59455581adc269a65881b4ffeb Building wheel for sharedmem (setup.py): started Building wheel for sharedmem (setup.py): finished with status 'done' Created wheel for sharedmem: filename=sharedmem-0.3.8-py3-none-any.whl size=18341 sha256=7df723510997dcd19c4917150306b90f14abc94da8113bfe0a147ae46d0ff65b Stored in directory: /tmp/pip-ephem-wheel-cache-00r55088/wheels/ee/ef/25/9562dc56f11d2b55824c1b1547eff68b75f1a0117d3b0867dd Building wheel for tabulate (setup.py): started Building wheel for tabulate (setup.py): finished with status 'done' Created wheel for tabulate: filename=tabulate-0.8.6-py3-none-any.whl size=23272 sha256=f139678835969ddb0eeec518a7ba4734a7323443542a47b2d0ac2bae29906983 Stored in directory: /tmp/pip-ephem-wheel-cache-00r55088/wheels/86/8c/d9/3b6c2f55efaefe656c52b725d2fdc5669085c83444979db8b3 Successfully built European-XFEL-Offline-Calibration dill prettytable pypandoc pyyaml sharedmem tabulate Installing collected packages: tabulate, rfc3986, prettytable, mistune, kafka-python, ipython-genutils, env-cache, dynaconf, commonmark, chardet, urllib3, tzdata, traitlets, testpath, sphinxcontrib-websupport, smmap, setuptools, rich, pyzmq, pyyaml, pyparsing, pillow, oauthlib, numpy, mypy-extensions, lxml, kiwisolver, joblib, Jinja2, idna, h11, entrypoints, docutils, dill, Cython, cycler, async-generator, astcheck, sharedmem, scipy, requests, pypandoc, pasha, pandas, matplotlib, jupyter-core, ipython, iminuit, h5py, gitdb, euxfel-bunch-pattern, anyio, xarray, sphinx, scikit-learn, requests-oauthlib, jupyter-client, httpcore, gitpython, cfelpyutils, oauth2-xfel-client, nbformat, ipykernel, httpx, extra-geom, extra-data, nbconvert, nbclient, metadata-client, jupyter-console, ipyparallel, EXtra-redu, calibration-client, princess, notebook, nbparameterise, European-XFEL-Offline-Calibration Attempting uninstall: mistune Found existing installation: mistune 3.0.2 Uninstalling mistune-3.0.2: Successfully uninstalled mistune-3.0.2 Attempting uninstall: commonmark Found existing installation: commonmark 0.8.1 Uninstalling commonmark-0.8.1: Successfully uninstalled commonmark-0.8.1 Attempting uninstall: urllib3 Found existing installation: urllib3 2.2.0 Uninstalling urllib3-2.2.0: Successfully uninstalled urllib3-2.2.0 Attempting uninstall: traitlets Found existing installation: traitlets 5.14.1 Uninstalling traitlets-5.14.1: Successfully uninstalled traitlets-5.14.1 Attempting uninstall: setuptools Found existing installation: setuptools 41.0.1 Uninstalling setuptools-41.0.1: Successfully uninstalled setuptools-41.0.1 Attempting uninstall: pyzmq Found existing installation: pyzmq 25.1.2 Uninstalling pyzmq-25.1.2: Successfully uninstalled pyzmq-25.1.2 Attempting uninstall: pyyaml Found existing installation: PyYAML 6.0.1 Uninstalling PyYAML-6.0.1: Successfully uninstalled PyYAML-6.0.1 Attempting uninstall: pillow Found existing installation: Pillow 5.4.1 Uninstalling Pillow-5.4.1: Successfully uninstalled Pillow-5.4.1 Attempting uninstall: Jinja2 Found existing installation: Jinja2 3.1.3 Uninstalling Jinja2-3.1.3: Successfully uninstalled Jinja2-3.1.3 Attempting uninstall: idna Found existing installation: idna 3.6 Uninstalling idna-3.6: Successfully uninstalled idna-3.6 Attempting uninstall: h11 Found existing installation: h11 0.14.0 Uninstalling h11-0.14.0: Successfully uninstalled h11-0.14.0 Attempting uninstall: docutils Found existing installation: docutils 0.14 Uninstalling docutils-0.14: Successfully uninstalled docutils-0.14 Attempting uninstall: requests Found existing installation: requests 2.31.0 Uninstalling requests-2.31.0: Successfully uninstalled requests-2.31.0 Attempting uninstall: jupyter-core Found existing installation: jupyter_core 5.7.1 Uninstalling jupyter_core-5.7.1: Successfully uninstalled jupyter_core-5.7.1 Attempting uninstall: ipython Found existing installation: ipython 8.12.3 Uninstalling ipython-8.12.3: Successfully uninstalled ipython-8.12.3 Attempting uninstall: anyio Found existing installation: anyio 4.2.0 Uninstalling anyio-4.2.0: Successfully uninstalled anyio-4.2.0 Attempting uninstall: sphinx Found existing installation: Sphinx 5.1.1 Uninstalling Sphinx-5.1.1: Successfully uninstalled Sphinx-5.1.1 Attempting uninstall: jupyter-client Found existing installation: jupyter_client 8.6.0 Uninstalling jupyter_client-8.6.0: Successfully uninstalled jupyter_client-8.6.0 Attempting uninstall: httpcore Found existing installation: httpcore 1.0.2 Uninstalling httpcore-1.0.2: Successfully uninstalled httpcore-1.0.2 Attempting uninstall: nbformat Found existing installation: nbformat 5.9.2 Uninstalling nbformat-5.9.2: Successfully uninstalled nbformat-5.9.2 Attempting uninstall: ipykernel Found existing installation: ipykernel 6.29.1 Uninstalling ipykernel-6.29.1: Successfully uninstalled ipykernel-6.29.1 Attempting uninstall: httpx Found existing installation: httpx 0.26.0 Uninstalling httpx-0.26.0: Successfully uninstalled httpx-0.26.0 Attempting uninstall: nbconvert Found existing installation: nbconvert 7.15.0 Uninstalling nbconvert-7.15.0: Successfully uninstalled nbconvert-7.15.0 Attempting uninstall: nbclient Found existing installation: nbclient 0.9.0 Uninstalling nbclient-0.9.0: Successfully uninstalled nbclient-0.9.0 Attempting uninstall: jupyter-console Found existing installation: jupyter-console 6.6.3 Uninstalling jupyter-console-6.6.3: Successfully uninstalled jupyter-console-6.6.3 Attempting uninstall: notebook Found existing installation: notebook 7.0.7 Uninstalling notebook-7.0.7: Successfully uninstalled notebook-7.0.7 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. jupyter-events 0.9.0 requires traitlets>=5.3, but you have traitlets 4.3.3 which is incompatible. jupyter-server 2.12.5 requires jupyter-client>=7.4.4, but you have jupyter-client 7.3.4 which is incompatible. jupyter-server 2.12.5 requires jupyter-core!=5.0.*,>=4.12, but you have jupyter-core 4.10.0 which is incompatible. jupyter-server 2.12.5 requires nbconvert>=6.4.4, but you have nbconvert 5.6.1 which is incompatible. jupyter-server 2.12.5 requires nbformat>=5.3.0, but you have nbformat 5.0.7 which is incompatible. jupyter-server 2.12.5 requires pyzmq>=24, but you have pyzmq 23.2.0 which is incompatible. jupyter-server 2.12.5 requires traitlets>=5.6.0, but you have traitlets 4.3.3 which is incompatible. jupyterlab 4.1.0 requires httpx>=0.25.0, but you have httpx 0.23.0 which is incompatible. jupyterlab 4.1.0 requires jinja2>=3.0.3, but you have jinja2 2.11.2 which is incompatible. jupyterlab-server 2.25.2 requires jinja2>=3.0.3, but you have jinja2 2.11.2 which is incompatible. jupyterlab-server 2.25.2 requires requests>=2.31, but you have requests 2.22.0 which is incompatible. mkdocs-material 9.0.15 requires jinja2>=3.0, but you have jinja2 2.11.2 which is incompatible. mkdocs-material 9.0.15 requires requests>=2.26, but you have requests 2.22.0 which is incompatible. Successfully installed Cython-0.29.21 EXtra-redu-0.0.8 European-XFEL-Offline-Calibration-1.0 Jinja2-2.11.2 anyio-3.7.1 astcheck-0.3.0 async-generator-1.10 calibration-client-11.2.0 cfelpyutils-2.0.6 chardet-3.0.4 commonmark-0.9.1 cycler-0.12.1 dill-0.3.0 docutils-0.17.1 dynaconf-3.1.4 entrypoints-0.4 env-cache-0.1 euxfel-bunch-pattern-0.6 extra-data-1.15.1 extra-geom-1.10.0 gitdb-4.0.11 gitpython-3.1.0 h11-0.12.0 h5py-3.5.0 httpcore-0.15.0 httpx-0.23.0 idna-2.8 iminuit-1.3.8 ipykernel-5.1.4 ipyparallel-6.2.4 ipython-7.12.0 ipython-genutils-0.2.0 joblib-1.3.2 jupyter-client-7.3.4 jupyter-console-6.1.0 jupyter-core-4.10.0 kafka-python-2.0.2 kiwisolver-1.4.5 lxml-4.5.0 matplotlib-3.4.2 metadata-client-4.0.0 mistune-0.8.4 mypy-extensions-1.0.0 nbclient-0.5.1 nbconvert-5.6.1 nbformat-5.0.7 nbparameterise-0.6 notebook-6.1.5 numpy-1.20.3 oauth2-xfel-client-6.1.1 oauthlib-3.2.2 pandas-2.0.3 pasha-0.1.1 pillow-10.2.0 prettytable-0.7.2 princess-0.5 pypandoc-1.4 pyparsing-3.1.1 pyyaml-5.3 pyzmq-23.2.0 requests-2.22.0 requests-oauthlib-1.3.1 rfc3986-1.5.0 rich-12.6.0 scikit-learn-0.22.2.post1 scipy-1.7.0 setuptools-69.0.3 sharedmem-0.3.8 smmap-5.0.1 sphinx-1.8.5 sphinxcontrib-websupport-1.2.4 tabulate-0.8.6 testpath-0.6.0 traitlets-4.3.3 tzdata-2023.4 urllib3-1.25.11 xarray-2022.3.0 [rtd-command-info] start-time: 2024-02-06T09:53:40.454964Z, end-time: 2024-02-06T09:53:40.522954Z, duration: 0, exit-code: 0 cat mkdocs.yml copyright: '© 2018 European XFEL' docs_dir: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/checkouts/latest/docs extra_css: - css/extra.css - css/custom.css - http://rtd.xfel.eu/static/css/badge_only.css - http://rtd.xfel.eu/static/css/readthedocs-doc-embed.css extra_javascript: - readthedocs-data.js - http://rtd.xfel.eu/static/core/js/readthedocs-doc-embed.js - http://rtd.xfel.eu/static/javascript/readthedocs-analytics.js google_analytics: null markdown_extensions: - abbr - pymdownx.highlight: anchor_linenums: true linenums_style: pymdownx-inline - pymdownx.superfences - pymdownx.inlinehilite - pymdownx.snippets: auto_append: - docs/includes/abbreviations.md - pymdownx.tasklist - pymdownx.arithmatex: generic: true - pymdownx.tabbed: alternate_style: true - pymdownx.details - pymdownx.mark - pymdownx.emoji: null - attr_list - def_list - footnotes - md_in_html - toc: permalink: true - admonition - tables - codehilite nav: - index.md - Operation: - CALCAT: operation/calibration_database.md - myMDC: operation/myMDC.md - Available Calibration notebooks: operation/available_notebooks.md - Calibration webservice: - The webservice: operation/webservice.md - Calibration Configuration: operation/calibration_configurations.md - Development: - Installation: development/installation.md - Workflow: development/workflow.md - How to write a notebook: development/how_to_write_xfel_calibrate_notebook_NBC.md - Configuration: development/configuration.md - Automated tests: development/testing_pipeline.md - Code Reference: reference/ - Reference: - FAQ: references/faq.md - Changelog: references/changelog.md plugins: - glightbox - search - autorefs - gen-files: scripts: - docs/gen_ref_pages.py - literate-nav: nav_file: SUMMARY.md - section-index - mkdocstrings: handlers: python: docstring_section_style: list docstring_style: sphinx import: - https://docs.python-requests.org/en/master/objects.inv repo_url: https://git.xfel.eu/calibration/pycalibration site_name: EuXFEL Offline calibration theme: features: - navigation.tabs - navigation.tabs.sticky - navigation.sections - navigation.top - navigation.instant - navigation.tracking - search.suggest - search.highlight - content.tabs.link - content.code.annotation - content.code.copy - navigation.indexes - content.tooltips - toc.follow language: en name: material palette: - scheme: light toggle: icon: material/lightbulb name: Switch to dark mode - scheme: slate toggle: icon: material/lightbulb-outline name: Switch to light mode [rtd-command-info] start-time: 2024-02-06T09:53:40.610619Z, end-time: 2024-02-06T09:53:49.872101Z, duration: 9, exit-code: 0 /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python -m mkdocs build --clean --site-dir _build/html --config-file mkdocs.yml INFO - Cleaning site directory INFO - Building documentation to directory: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/checkouts/latest/_build/html INFO - The following pages exist in the docs directory, but are not included in the "nav" configuration: - overview.md - development/advanced.md - development/contributing_to_gitlab.md - includes/abbreviations.md WARNING - Documentation file 'development/configuration.md' contains a link to 'reference/xfel-calibrate/calibrate.md' which is not found in the documentation files. WARNING - Documentation file 'development/workflow.md' contains a link to 'development/SUMMARY.md' which is not found in the documentation files. WARNING - Documentation file 'development/workflow.md' contains a link to 'reference/src/cal_tools/files.md' which is not found in the documentation files. WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:43: No type or annotation for parameter 'run' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:43: Parameter 'run' does not appear in the function signature WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:389: No type or annotation for returned value 'bool' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:453: No type or annotation for returned value 'float' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:420: No type or annotation for returned value 'int' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:401: No type or annotation for returned value 'list' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:443: No type or annotation for returned value 'float' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:407: No type or annotation for returned value 'float' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:430: No type or annotation for returned value 'int' ERROR - griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:247: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:116: Parameter 'caldata' does not appear in the function signature WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:120: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:528: No type or annotation for returned value 'DICT' ERROR - griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:401: No type or annotation for parameter '**condition_params' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:401: Parameter '**condition_params' does not appear in the function signature ERROR - griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:577: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:469: Failed to get 'name: description' pair from 'Any further keyword arguments are passed on to' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:470: Failed to get 'name: description' pair from 'CalibrationClient.__init__().' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:473: No type or annotation for returned value 1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:928: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:484: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:411: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:440: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:232: No type or annotation for returned value 1 ERROR - griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:179: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:249: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:295: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:135: Parameter 'args,' does not appear in the function signature WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:140: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:559: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:529: No type or annotation for parameter 'kwargs' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:533: No type or annotation for returned value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:23: No type or annotation for returned value 1 ERROR - griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:70: No type or annotation for yielded value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:43: No type or annotation for yielded value 1 WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/tools.py:1059: No type or annotation for returned value 'str' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/gotthard2/gotthard2lib.py:54: No type or annotation for returned value 'str' WARNING - griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/jungfrau/jfstrixel.py:75: No type or annotation for returned value 1 WARNING - references/changelog.md: Could not find cross-reference target '[Dark]' WARNING - references/changelog.md: Could not find cross-reference target '[Correct]' WARNING - 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