Read the Docs build information
Build id: 28614
Project: european-xfel-offline-calibration
Version: latest
Commit: 80f0e8a2962d16321ba1cb35585f9fb1ba6d8ea1
Date: 2024-08-01T10:01:23.374381Z
State: finished
Success: True


[rtd-command-info] start-time: 2024-08-01T10:04:41.408260Z, end-time: 2024-08-01T10:05:03.700884Z, duration: 22, exit-code: 0
git clone --no-single-branch --depth 50 http://git.xfel.eu/calibration/pycalibration .
Cloning into '.'...
warning: redirecting to https://git.xfel.eu/calibration/pycalibration.git/

[rtd-command-info] start-time: 2024-08-01T10:05:04.072356Z, end-time: 2024-08-01T10:05:04.894335Z, duration: 0, exit-code: 0
git checkout --force origin/master
Note: checking out 'origin/master'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:

  git checkout -b <new-branch-name>

HEAD is now at 80f0e8a2 Merge branch 'feat/multi-table-format' into 'master'

[rtd-command-info] start-time: 2024-08-01T10:05:04.979241Z, end-time: 2024-08-01T10:05:05.039306Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2024-08-01T10:05:06.954328Z, end-time: 2024-08-01T10:05:12.123913Z, duration: 5, exit-code: 0
python3.8 -mvirtualenv /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest
Using base prefix '/home/docs/.pyenv/versions/3.8.0'
New python executable in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python3.8
Also creating executable in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2024-08-01T10:05:12.212577Z, end-time: 2024-08-01T10:05:13.042730Z, duration: 0, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python -m pip install --upgrade --no-cache-dir pip
Requirement already satisfied: pip in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (24.2)

[rtd-command-info] start-time: 2024-08-01T10:05:13.129336Z, end-time: 2024-08-01T10:05:38.480331Z, duration: 25, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python -m pip install --upgrade --no-cache-dir jinja2==2.11.3 markupsafe==2.0.1 Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 mkdocs<1.1
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Building wheels for collected packages: mock, pillow
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Installing collected packages: snowballstemmer, pytz, Pygments, mock, docutils, zipp, urllib3, tornado, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, setuptools, PyYAML, pillow, packaging, markupsafe, imagesize, idna, future, click, charset-normalizer, certifi, babel, alabaster, requests, livereload, jinja2, importlib-metadata, commonmark, sphinx, Markdown, recommonmark, mkdocs
  Attempting uninstall: setuptools
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Successfully installed Markdown-3.6 PyYAML-6.0.1 Pygments-2.3.1 alabaster-0.7.13 babel-2.15.0 certifi-2024.7.4 charset-normalizer-3.3.2 click-8.1.7 commonmark-0.8.1 docutils-0.14 future-1.0.0 idna-3.7 imagesize-1.4.1 importlib-metadata-8.2.0 jinja2-2.11.3 livereload-2.7.0 markupsafe-2.0.1 mkdocs-1.0.4 mock-1.0.1 packaging-24.1 pillow-5.4.1 pytz-2024.1 recommonmark-0.5.0 requests-2.32.3 setuptools-41.0.1 snowballstemmer-2.2.0 sphinx-5.1.1 sphinxcontrib-applehelp-1.0.4 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.1 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.3 sphinxcontrib-serializinghtml-1.1.5 tornado-6.4.1 urllib3-2.2.2 zipp-3.19.2

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Downloading types_python_dateutil-2.9.0.20240316-py3-none-any.whl (9.7 kB)
Building wheels for collected packages: mkdocs-redirects
  Building wheel for mkdocs-redirects (setup.py): started
  Building wheel for mkdocs-redirects (setup.py): finished with status 'done'
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  Stored in directory: /tmp/pip-ephem-wheel-cache-wyglzbt1/wheels/56/27/09/2113947d506c30867dbf5b5ab09a5434c50757a976e6ac2f1f
Successfully built mkdocs-redirects
Installing collected packages: webencodings, wcwidth, pure-eval, ptyprocess, pickleshare, mkdocs-glightbox, fastjsonschema, backcall, widgetsnbextension, websocket-client, webcolors, watchdog, uri-template, typing-extensions, types-python-dateutil, traitlets, tomli, tinycss2, terminado, soupsieve, sniffio, six, send2trash, rpds-py, rfc3986-validator, regex, qtpy, pyzmq, pyyaml-env-tag, python-json-logger, pygments, pycparser, psutil, prompt-toolkit, prometheus-client, platformdirs, pkgutil-resolve-name, pexpect, parso, pandocfilters, overrides, nest-asyncio, mkdocs-material-extensions, mistune, mergedeep, jupyterlab-widgets, jupyterlab-pygments, jsonpointer, json5, jinja2, importlib-resources, h11, fqdn, executing, exceptiongroup, defusedxml, decorator, debugpy, colorama, attrs, rfc3339-validator, referencing, python-dateutil, matplotlib-inline, markdown, jupyter-server-terminals, jupyter-core, jedi, httpcore, griffe, comm, cffi, bleach, beautifulsoup4, async-lru, asttokens, anyio, stack-data, pymdown-extensions, jupyter-client, jsonschema-specifications, httpx, ghp-import, arrow, argon2-cffi-bindings, mkdocs, jsonschema, isoduration, ipython, argon2-cffi, nbformat, mkdocs-section-index, mkdocs-redirects, mkdocs-material, mkdocs-literate-nav, mkdocs-gen-files, mkdocs-autorefs, ipywidgets, ipykernel, qtconsole, nbclient, mkdocstrings, jupyter-events, jupyter-console, nbconvert, mkdocstrings-python, jupyter-server, notebook-shim, jupyterlab-server, jupyter-lsp, jupyterlab, notebook, jupyter
  Attempting uninstall: pygments
    Found existing installation: Pygments 2.3.1
    Uninstalling Pygments-2.3.1:
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  Attempting uninstall: jinja2
    Found existing installation: Jinja2 2.11.3
    Uninstalling Jinja2-2.11.3:
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  Attempting uninstall: markdown
    Found existing installation: Markdown 3.6
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    Found existing installation: mkdocs 1.0.4
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Successfully installed anyio-4.4.0 argon2-cffi-23.1.0 argon2-cffi-bindings-21.2.0 arrow-1.3.0 asttokens-2.4.1 async-lru-2.0.4 attrs-23.2.0 backcall-0.2.0 beautifulsoup4-4.12.3 bleach-6.1.0 cffi-1.16.0 colorama-0.4.6 comm-0.2.2 debugpy-1.8.2 decorator-5.1.1 defusedxml-0.7.1 exceptiongroup-1.2.2 executing-2.0.1 fastjsonschema-2.20.0 fqdn-1.5.1 ghp-import-2.1.0 griffe-0.27.1 h11-0.14.0 httpcore-1.0.5 httpx-0.27.0 importlib-resources-6.4.0 ipykernel-6.29.5 ipython-8.12.3 ipywidgets-8.1.3 isoduration-20.11.0 jedi-0.19.1 jinja2-3.1.4 json5-0.9.25 jsonpointer-3.0.0 jsonschema-4.23.0 jsonschema-specifications-2023.12.1 jupyter-1.0.0 jupyter-client-8.6.2 jupyter-console-6.6.3 jupyter-core-5.7.2 jupyter-events-0.10.0 jupyter-lsp-2.2.5 jupyter-server-2.14.2 jupyter-server-terminals-0.5.3 jupyterlab-4.2.4 jupyterlab-pygments-0.3.0 jupyterlab-server-2.27.3 jupyterlab-widgets-3.0.11 markdown-3.3.7 matplotlib-inline-0.1.7 mergedeep-1.3.4 mistune-3.0.2 mkdocs-1.4.2 mkdocs-autorefs-1.0.1 mkdocs-gen-files-0.4.0 mkdocs-glightbox-0.4.0 mkdocs-literate-nav-0.5.0 mkdocs-material-9.0.15 mkdocs-material-extensions-1.3.1 mkdocs-redirects-1.2.0 mkdocs-section-index-0.3.5 mkdocstrings-0.19.0 mkdocstrings-python-0.8.3 nbclient-0.10.0 nbconvert-7.16.4 nbformat-5.10.4 nest-asyncio-1.6.0 notebook-7.2.1 notebook-shim-0.2.4 overrides-7.7.0 pandocfilters-1.5.1 parso-0.8.4 pexpect-4.9.0 pickleshare-0.7.5 pkgutil-resolve-name-1.3.10 platformdirs-4.2.2 prometheus-client-0.20.0 prompt-toolkit-3.0.47 psutil-6.0.0 ptyprocess-0.7.0 pure-eval-0.2.3 pycparser-2.22 pygments-2.18.0 pymdown-extensions-10.4 python-dateutil-2.9.0.post0 python-json-logger-2.0.7 pyyaml-env-tag-0.1 pyzmq-26.0.3 qtconsole-5.5.2 qtpy-2.4.1 referencing-0.35.1 regex-2024.7.24 rfc3339-validator-0.1.4 rfc3986-validator-0.1.1 rpds-py-0.19.1 send2trash-1.8.3 six-1.16.0 sniffio-1.3.1 soupsieve-2.5 stack-data-0.6.3 terminado-0.18.1 tinycss2-1.3.0 tomli-2.0.1 traitlets-5.14.3 types-python-dateutil-2.9.0.20240316 typing-extensions-4.12.2 uri-template-1.3.0 watchdog-4.0.1 wcwidth-0.2.13 webcolors-24.6.0 webencodings-0.5.1 websocket-client-1.8.0 widgetsnbextension-4.0.11

[rtd-command-info] start-time: 2024-08-01T10:06:02.398502Z, end-time: 2024-08-01T10:07:17.633189Z, duration: 75, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python -m pip install --upgrade --upgrade-strategy eager --no-cache-dir .
Processing /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/checkouts/latest
  Installing build dependencies: started
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  Getting requirements to build wheel: started
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Collecting Cython==0.29.21 (from European-XFEL-Offline-Calibration==1.0)
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Collecting Jinja2==2.11.2 (from European-XFEL-Offline-Calibration==1.0)
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Requirement already satisfied: markupsafe==2.0.1 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from European-XFEL-Offline-Calibration==1.0) (2.0.1)
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Collecting dill==0.3.0 (from European-XFEL-Offline-Calibration==1.0)
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Collecting docutils==0.17.1 (from European-XFEL-Offline-Calibration==1.0)
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Collecting extra-data==1.15.1 (from European-XFEL-Offline-Calibration==1.0)
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Collecting gitpython==3.1.0 (from European-XFEL-Offline-Calibration==1.0)
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Collecting ipython-genutils==0.2.0 (from European-XFEL-Offline-Calibration==1.0)
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Collecting jupyter-client==7.3.4 (from European-XFEL-Offline-Calibration==1.0)
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Collecting pillow==10.3.0 (from European-XFEL-Offline-Calibration==1.0)
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Collecting prettytable==0.7.2 (from European-XFEL-Offline-Calibration==1.0)
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Collecting princess==0.5 (from European-XFEL-Offline-Calibration==1.0)
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Collecting pymunge==0.1.3 (from European-XFEL-Offline-Calibration==1.0)
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Collecting pypandoc==1.4 (from European-XFEL-Offline-Calibration==1.0)
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Collecting python-dateutil==2.8.2 (from European-XFEL-Offline-Calibration==1.0)
  Downloading python_dateutil-2.8.2-py2.py3-none-any.whl.metadata (8.2 kB)
Collecting pyyaml==5.3 (from European-XFEL-Offline-Calibration==1.0)
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Collecting pyzmq==23.2.0 (from European-XFEL-Offline-Calibration==1.0)
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Collecting requests==2.22.0 (from European-XFEL-Offline-Calibration==1.0)
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Collecting scikit-learn==0.22.2.post1 (from European-XFEL-Offline-Calibration==1.0)
  Downloading scikit_learn-0.22.2.post1-cp38-cp38-manylinux1_x86_64.whl.metadata (7.2 kB)
Collecting scipy==1.7.0 (from European-XFEL-Offline-Calibration==1.0)
  Downloading scipy-1.7.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting sharedmem==0.3.8 (from European-XFEL-Offline-Calibration==1.0)
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Collecting sphinx==1.8.5 (from European-XFEL-Offline-Calibration==1.0)
  Downloading Sphinx-1.8.5-py2.py3-none-any.whl.metadata (7.2 kB)
Collecting tabulate==0.8.6 (from European-XFEL-Offline-Calibration==1.0)
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Collecting traitlets==4.3.3 (from European-XFEL-Offline-Calibration==1.0)
  Downloading traitlets-4.3.3-py2.py3-none-any.whl.metadata (1.1 kB)
Collecting xarray==2022.3.0 (from European-XFEL-Offline-Calibration==1.0)
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Collecting EXtra-redu==0.0.8 (from European-XFEL-Offline-Calibration==1.0)
  Downloading EXtra_redu-0.0.8-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.2 kB)
Collecting rich==12.6.0 (from European-XFEL-Offline-Calibration==1.0)
  Downloading rich-12.6.0-py3-none-any.whl.metadata (18 kB)
Collecting httpx==0.23.0 (from European-XFEL-Offline-Calibration==1.0)
  Downloading httpx-0.23.0-py3-none-any.whl.metadata (52 kB)
Collecting oauthlib (from calibration-client==11.3.0->European-XFEL-Offline-Calibration==1.0)
  Downloading oauthlib-3.2.2-py3-none-any.whl.metadata (7.5 kB)
Collecting requests-oauthlib (from calibration-client==11.3.0->European-XFEL-Offline-Calibration==1.0)
  Downloading requests_oauthlib-2.0.0-py2.py3-none-any.whl.metadata (11 kB)
Collecting oauth2-xfel-client>=6.1 (from calibration-client==11.3.0->European-XFEL-Offline-Calibration==1.0)
  Downloading oauth2_xfel_client-6.1.1-py3-none-any.whl.metadata (6.6 kB)
Requirement already satisfied: pytz in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from calibration-client==11.3.0->European-XFEL-Offline-Calibration==1.0) (2024.1)
Collecting mypy-extensions>=0.4.3 (from cfelpyutils==2.0.6->European-XFEL-Offline-Calibration==1.0)
  Downloading mypy_extensions-1.0.0-py3-none-any.whl.metadata (1.1 kB)
Collecting pandas>=1.1.5 (from cfelpyutils==2.0.6->European-XFEL-Offline-Calibration==1.0)
  Downloading pandas-2.0.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (18 kB)
Collecting numba (from dynflatfield==1.0.0->European-XFEL-Offline-Calibration==1.0)
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Requirement already satisfied: psutil in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from dynflatfield==1.0.0->European-XFEL-Offline-Calibration==1.0) (6.0.0)
Collecting scikit-image (from dynflatfield==1.0.0->European-XFEL-Offline-Calibration==1.0)
  Downloading scikit_image-0.21.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB)
Collecting threadpoolctl (from dynflatfield==1.0.0->European-XFEL-Offline-Calibration==1.0)
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Requirement already satisfied: packaging in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from extra-data==1.15.1->European-XFEL-Offline-Calibration==1.0) (24.1)
Collecting euxfel-bunch-pattern>=0.6 (from EXtra-redu==0.0.8->European-XFEL-Offline-Calibration==1.0)
  Downloading euxfel_bunch_pattern-0.6-py3-none-any.whl.metadata (766 bytes)
Collecting gitdb<5,>=4.0.1 (from gitpython==3.1.0->European-XFEL-Offline-Calibration==1.0)
  Downloading gitdb-4.0.11-py3-none-any.whl.metadata (1.2 kB)
Requirement already satisfied: certifi in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from httpx==0.23.0->European-XFEL-Offline-Calibration==1.0) (2024.7.4)
Requirement already satisfied: sniffio in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from httpx==0.23.0->European-XFEL-Offline-Calibration==1.0) (1.3.1)
Collecting rfc3986<2,>=1.3 (from rfc3986[idna2008]<2,>=1.3->httpx==0.23.0->European-XFEL-Offline-Calibration==1.0)
  Downloading rfc3986-1.5.0-py2.py3-none-any.whl.metadata (6.5 kB)
Collecting httpcore<0.16.0,>=0.15.0 (from httpx==0.23.0->European-XFEL-Offline-Calibration==1.0)
  Downloading httpcore-0.15.0-py3-none-any.whl.metadata (15 kB)
Requirement already satisfied: tornado>=4.2 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipykernel==5.1.4->European-XFEL-Offline-Calibration==1.0) (6.4.1)
Requirement already satisfied: decorator in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipyparallel==6.2.4->European-XFEL-Offline-Calibration==1.0) (5.1.1)
Requirement already satisfied: setuptools>=18.5 in /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages (from ipython==7.12.0->European-XFEL-Offline-Calibration==1.0) (41.0.1)
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Building wheels for collected packages: European-XFEL-Offline-Calibration, dill, prettytable, pypandoc, pyyaml, sharedmem, tabulate
  Building wheel for European-XFEL-Offline-Calibration (pyproject.toml): started
  Building wheel for European-XFEL-Offline-Calibration (pyproject.toml): finished with status 'done'
  Created wheel for European-XFEL-Offline-Calibration: filename=European_XFEL_Offline_Calibration-1.0-cp38-cp38-linux_x86_64.whl size=1714459 sha256=cfe25393cac9a6270fc4cff50dcfc0452a676c5fab6514be2c80aea2a3de6e0d
  Stored in directory: /tmp/pip-ephem-wheel-cache-v28of_ti/wheels/22/7d/09/eb4f2a2bc8741186a0b6a6c96994f65acdd8e2af144db3f698
  Building wheel for dill (setup.py): started
  Building wheel for dill (setup.py): finished with status 'done'
  Created wheel for dill: filename=dill-0.3.0-py3-none-any.whl size=77508 sha256=ec7e3d575118bbda921f1fe72194ee52282369b37d2bae8e3c4b7121d52d6868
  Stored in directory: /tmp/pip-ephem-wheel-cache-v28of_ti/wheels/ec/e7/fb/9b59e2dbda9eeefab51f7cb41df434ff463c4afe1985abff24
  Building wheel for prettytable (setup.py): started
  Building wheel for prettytable (setup.py): finished with status 'done'
  Created wheel for prettytable: filename=prettytable-0.7.2-py3-none-any.whl size=13699 sha256=0d8d99bfb83ab9b0bd32400de4ee0d74450f272a49af44abcbe559933b784e9f
  Stored in directory: /tmp/pip-ephem-wheel-cache-v28of_ti/wheels/48/6d/77/9517cb933af254f51a446f1a5ec9c2be3e45f17384940bce68
  Building wheel for pypandoc (setup.py): started
  Building wheel for pypandoc (setup.py): finished with status 'done'
  Created wheel for pypandoc: filename=pypandoc-1.4-py3-none-any.whl size=16716 sha256=81d667c94cd8bc74186a2f2d6d69c5358566541b5f36810444a28ba107661cbc
  Stored in directory: /tmp/pip-ephem-wheel-cache-v28of_ti/wheels/f7/d9/a0/ef1fe56c058e41d6271a4935caaeae89d43e2280504690a329
  Building wheel for pyyaml (setup.py): started
  Building wheel for pyyaml (setup.py): finished with status 'done'
  Created wheel for pyyaml: filename=PyYAML-5.3-cp38-cp38-linux_x86_64.whl size=44228 sha256=4222f47ac044ae62cb31e24b44d9e2814a9fc8a5001d46774dacc050ef43ba41
  Stored in directory: /tmp/pip-ephem-wheel-cache-v28of_ti/wheels/e4/94/ec/65e430f66fda7a86c08f61ce59455581adc269a65881b4ffeb
  Building wheel for sharedmem (setup.py): started
  Building wheel for sharedmem (setup.py): finished with status 'done'
  Created wheel for sharedmem: filename=sharedmem-0.3.8-py3-none-any.whl size=18341 sha256=f91954682c737b9566c509cca014819046e6e59989d8ea2b715f4bf4b5f29473
  Stored in directory: /tmp/pip-ephem-wheel-cache-v28of_ti/wheels/ee/ef/25/9562dc56f11d2b55824c1b1547eff68b75f1a0117d3b0867dd
  Building wheel for tabulate (setup.py): started
  Building wheel for tabulate (setup.py): finished with status 'done'
  Created wheel for tabulate: filename=tabulate-0.8.6-py3-none-any.whl size=23272 sha256=520bc301db94e029be8209e51d126cd6846cd0ef600b83541a6eb916e629e3c5
  Stored in directory: /tmp/pip-ephem-wheel-cache-v28of_ti/wheels/86/8c/d9/3b6c2f55efaefe656c52b725d2fdc5669085c83444979db8b3
Successfully built European-XFEL-Offline-Calibration dill prettytable pypandoc pyyaml sharedmem tabulate
Installing collected packages: tabulate, rfc3986, pymunge, prettytable, mistune, kafka-python, ipython-genutils, env-cache, dynaconf, commonmark, chardet, urllib3, tzdata, traitlets, threadpoolctl, testpath, sphinxcontrib-websupport, smmap, setuptools, rich, pyzmq, pyyaml, python-dateutil, pyparsing, pillow, oauthlib, numpy, networkx, mypy-extensions, lxml, llvmlite, kiwisolver, joblib, Jinja2, idna, h11, entrypoints, docutils, dill, Cython, cycler, async-generator, astcheck, tifffile, sharedmem, scipy, requests, PyWavelets, pypandoc, pasha, pandas, numba, matplotlib, jupyter-core, ipython, iminuit, imageio, h5py, gitdb, euxfel-bunch-pattern, anyio, xarray, sphinx, scikit-learn, scikit-image, requests-oauthlib, jupyter-client, httpcore, gitpython, cfelpyutils, oauth2-xfel-client, nbformat, ipykernel, httpx, extra-geom, extra-data, dynflatfield, nbconvert, nbclient, metadata-client, jupyter-console, ipyparallel, EXtra-redu, calibration-client, princess, notebook, nbparameterise, European-XFEL-Offline-Calibration
  Attempting uninstall: mistune
    Found existing installation: mistune 3.0.2
    Uninstalling mistune-3.0.2:
      Successfully uninstalled mistune-3.0.2
  Attempting uninstall: commonmark
    Found existing installation: commonmark 0.8.1
    Uninstalling commonmark-0.8.1:
      Successfully uninstalled commonmark-0.8.1
  Attempting uninstall: urllib3
    Found existing installation: urllib3 2.2.2
    Uninstalling urllib3-2.2.2:
      Successfully uninstalled urllib3-2.2.2
  Attempting uninstall: traitlets
    Found existing installation: traitlets 5.14.3
    Uninstalling traitlets-5.14.3:
      Successfully uninstalled traitlets-5.14.3
  Attempting uninstall: setuptools
    Found existing installation: setuptools 41.0.1
    Uninstalling setuptools-41.0.1:
      Successfully uninstalled setuptools-41.0.1
  Attempting uninstall: pyzmq
    Found existing installation: pyzmq 26.0.3
    Uninstalling pyzmq-26.0.3:
      Successfully uninstalled pyzmq-26.0.3
  Attempting uninstall: pyyaml
    Found existing installation: PyYAML 6.0.1
    Uninstalling PyYAML-6.0.1:
      Successfully uninstalled PyYAML-6.0.1
  Attempting uninstall: python-dateutil
    Found existing installation: python-dateutil 2.9.0.post0
    Uninstalling python-dateutil-2.9.0.post0:
      Successfully uninstalled python-dateutil-2.9.0.post0
  Attempting uninstall: pillow
    Found existing installation: Pillow 5.4.1
    Uninstalling Pillow-5.4.1:
      Successfully uninstalled Pillow-5.4.1
  Attempting uninstall: Jinja2
    Found existing installation: Jinja2 3.1.4
    Uninstalling Jinja2-3.1.4:
      Successfully uninstalled Jinja2-3.1.4
  Attempting uninstall: idna
    Found existing installation: idna 3.7
    Uninstalling idna-3.7:
      Successfully uninstalled idna-3.7
  Attempting uninstall: h11
    Found existing installation: h11 0.14.0
    Uninstalling h11-0.14.0:
      Successfully uninstalled h11-0.14.0
  Attempting uninstall: docutils
    Found existing installation: docutils 0.14
    Uninstalling docutils-0.14:
      Successfully uninstalled docutils-0.14
  Attempting uninstall: requests
    Found existing installation: requests 2.32.3
    Uninstalling requests-2.32.3:
      Successfully uninstalled requests-2.32.3
  Attempting uninstall: jupyter-core
    Found existing installation: jupyter_core 5.7.2
    Uninstalling jupyter_core-5.7.2:
      Successfully uninstalled jupyter_core-5.7.2
  Attempting uninstall: ipython
    Found existing installation: ipython 8.12.3
    Uninstalling ipython-8.12.3:
      Successfully uninstalled ipython-8.12.3
  Attempting uninstall: anyio
    Found existing installation: anyio 4.4.0
    Uninstalling anyio-4.4.0:
      Successfully uninstalled anyio-4.4.0
  Attempting uninstall: sphinx
    Found existing installation: Sphinx 5.1.1
    Uninstalling Sphinx-5.1.1:
      Successfully uninstalled Sphinx-5.1.1
  Attempting uninstall: jupyter-client
    Found existing installation: jupyter_client 8.6.2
    Uninstalling jupyter_client-8.6.2:
      Successfully uninstalled jupyter_client-8.6.2
  Attempting uninstall: httpcore
    Found existing installation: httpcore 1.0.5
    Uninstalling httpcore-1.0.5:
      Successfully uninstalled httpcore-1.0.5
  Attempting uninstall: nbformat
    Found existing installation: nbformat 5.10.4
    Uninstalling nbformat-5.10.4:
      Successfully uninstalled nbformat-5.10.4
  Attempting uninstall: ipykernel
    Found existing installation: ipykernel 6.29.5
    Uninstalling ipykernel-6.29.5:
      Successfully uninstalled ipykernel-6.29.5
  Attempting uninstall: httpx
    Found existing installation: httpx 0.27.0
    Uninstalling httpx-0.27.0:
      Successfully uninstalled httpx-0.27.0
  Attempting uninstall: nbconvert
    Found existing installation: nbconvert 7.16.4
    Uninstalling nbconvert-7.16.4:
      Successfully uninstalled nbconvert-7.16.4
  Attempting uninstall: nbclient
    Found existing installation: nbclient 0.10.0
    Uninstalling nbclient-0.10.0:
      Successfully uninstalled nbclient-0.10.0
  Attempting uninstall: jupyter-console
    Found existing installation: jupyter-console 6.6.3
    Uninstalling jupyter-console-6.6.3:
      Successfully uninstalled jupyter-console-6.6.3
  Attempting uninstall: notebook
    Found existing installation: notebook 7.2.1
    Uninstalling notebook-7.2.1:
      Successfully uninstalled notebook-7.2.1
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
jupyter-events 0.10.0 requires traitlets>=5.3, but you have traitlets 4.3.3 which is incompatible.
jupyter-server 2.14.2 requires jinja2>=3.0.3, but you have jinja2 2.11.2 which is incompatible.
jupyter-server 2.14.2 requires jupyter-client>=7.4.4, but you have jupyter-client 7.3.4 which is incompatible.
jupyter-server 2.14.2 requires jupyter-core!=5.0.*,>=4.12, but you have jupyter-core 4.10.0 which is incompatible.
jupyter-server 2.14.2 requires nbconvert>=6.4.4, but you have nbconvert 5.6.1 which is incompatible.
jupyter-server 2.14.2 requires nbformat>=5.3.0, but you have nbformat 5.0.7 which is incompatible.
jupyter-server 2.14.2 requires pyzmq>=24, but you have pyzmq 23.2.0 which is incompatible.
jupyter-server 2.14.2 requires traitlets>=5.6.0, but you have traitlets 4.3.3 which is incompatible.
jupyterlab 4.2.4 requires httpx>=0.25.0, but you have httpx 0.23.0 which is incompatible.
jupyterlab 4.2.4 requires ipykernel>=6.5.0, but you have ipykernel 5.1.4 which is incompatible.
jupyterlab 4.2.4 requires jinja2>=3.0.3, but you have jinja2 2.11.2 which is incompatible.
jupyterlab-server 2.27.3 requires jinja2>=3.0.3, but you have jinja2 2.11.2 which is incompatible.
jupyterlab-server 2.27.3 requires requests>=2.31, but you have requests 2.22.0 which is incompatible.
mkdocs-material 9.0.15 requires jinja2>=3.0, but you have jinja2 2.11.2 which is incompatible.
mkdocs-material 9.0.15 requires requests>=2.26, but you have requests 2.22.0 which is incompatible.
Successfully installed Cython-0.29.21 EXtra-redu-0.0.8 European-XFEL-Offline-Calibration-1.0 Jinja2-2.11.2 PyWavelets-1.4.1 anyio-3.7.1 astcheck-0.3.0 async-generator-1.10 calibration-client-11.3.0 cfelpyutils-2.0.6 chardet-3.0.4 commonmark-0.9.1 cycler-0.12.1 dill-0.3.0 docutils-0.17.1 dynaconf-3.1.4 dynflatfield-1.0.0 entrypoints-0.4 env-cache-0.1 euxfel-bunch-pattern-0.6 extra-data-1.15.1 extra-geom-1.10.0 gitdb-4.0.11 gitpython-3.1.0 h11-0.12.0 h5py-3.5.0 httpcore-0.15.0 httpx-0.23.0 idna-2.8 imageio-2.34.2 iminuit-1.3.8 ipykernel-5.1.4 ipyparallel-6.2.4 ipython-7.12.0 ipython-genutils-0.2.0 joblib-1.4.2 jupyter-client-7.3.4 jupyter-console-6.1.0 jupyter-core-4.10.0 kafka-python-2.0.2 kiwisolver-1.4.5 llvmlite-0.39.1 lxml-4.5.0 matplotlib-3.4.2 metadata-client-4.0.0 mistune-0.8.4 mypy-extensions-1.0.0 nbclient-0.5.1 nbconvert-5.6.1 nbformat-5.0.7 nbparameterise-0.6 networkx-3.1 notebook-6.1.5 numba-0.56.4 numpy-1.20.3 oauth2-xfel-client-6.1.1 oauthlib-3.2.2 pandas-2.0.3 pasha-0.1.1 pillow-10.3.0 prettytable-0.7.2 princess-0.5 pymunge-0.1.3 pypandoc-1.4 pyparsing-3.1.2 python-dateutil-2.8.2 pyyaml-5.3 pyzmq-23.2.0 requests-2.22.0 requests-oauthlib-2.0.0 rfc3986-1.5.0 rich-12.6.0 scikit-image-0.19.3 scikit-learn-0.22.2.post1 scipy-1.7.0 setuptools-72.1.0 sharedmem-0.3.8 smmap-5.0.1 sphinx-1.8.5 sphinxcontrib-websupport-1.2.4 tabulate-0.8.6 testpath-0.6.0 threadpoolctl-3.5.0 tifffile-2023.7.10 traitlets-4.3.3 tzdata-2024.1 urllib3-1.25.11 xarray-2022.3.0

[rtd-command-info] start-time: 2024-08-01T10:07:17.877508Z, end-time: 2024-08-01T10:07:17.937942Z, duration: 0, exit-code: 0
cat mkdocs.yml
copyright: '&copy; 2018 <a href="https://www.xfel.eu/"  target="_blank" rel="noopener">European
  XFEL</a>'
docs_dir: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/checkouts/latest/docs
extra_css:
- css/extra.css
- css/custom.css
- http://rtd.xfel.eu/static/css/badge_only.css
- http://rtd.xfel.eu/static/css/readthedocs-doc-embed.css
extra_javascript:
- readthedocs-data.js
- http://rtd.xfel.eu/static/core/js/readthedocs-doc-embed.js
- http://rtd.xfel.eu/static/javascript/readthedocs-analytics.js
google_analytics: null
markdown_extensions:
- abbr
- pymdownx.highlight:
    anchor_linenums: true
    linenums_style: pymdownx-inline
- pymdownx.superfences
- pymdownx.inlinehilite
- pymdownx.snippets:
    auto_append:
    - docs/includes/abbreviations.md
- pymdownx.tasklist
- pymdownx.arithmatex:
    generic: true
- pymdownx.tabbed:
    alternate_style: true
- pymdownx.details
- pymdownx.mark
- pymdownx.emoji: null
- attr_list
- def_list
- footnotes
- md_in_html
- toc:
    permalink: true
- admonition
- tables
- codehilite
nav:
- index.md
- Operation:
  - CALCAT: operation/calibration_database.md
  - myMDC: operation/myMDC.md
  - Available Calibration notebooks: operation/available_notebooks.md
  - Calibration webservice:
    - The webservice: operation/webservice.md
    - Calibration Configuration: operation/calibration_configurations.md
  - Troubleshooting:
    - General: operation/troubleshooting.md
    - Detector specific: operation/detector_specific_troubleshooting.md
- Development:
  - Installation: development/installation.md
  - Workflow: development/workflow.md
  - How to write a notebook: development/how_to_write_xfel_calibrate_notebook_NBC.md
  - Configuration: development/configuration.md
  - Automated tests: development/testing_pipeline.md
- Code Reference: reference/
- Reference:
  - FAQ: references/faq.md
  - Changelog: references/changelog.md
plugins:
- glightbox
- search
- autorefs
- gen-files:
    scripts:
    - docs/gen_ref_pages.py
- literate-nav:
    nav_file: SUMMARY.md
- section-index
- mkdocstrings:
    handlers:
      python:
        docstring_section_style: list
        docstring_style: sphinx
        import:
        - https://docs.python-requests.org/en/master/objects.inv
repo_url: https://git.xfel.eu/calibration/pycalibration
site_name: EuXFEL Offline calibration
theme:
  features:
  - navigation.tabs
  - navigation.tabs.sticky
  - navigation.sections
  - navigation.top
  - navigation.instant
  - navigation.tracking
  - search.suggest
  - search.highlight
  - content.tabs.link
  - content.code.annotation
  - content.code.copy
  - navigation.indexes
  - content.tooltips
  - toc.follow
  language: en
  name: material
  palette:
  - scheme: light
    toggle:
      icon: material/lightbulb
      name: Switch to dark mode
  - scheme: slate
    toggle:
      icon: material/lightbulb-outline
      name: Switch to light mode

[rtd-command-info] start-time: 2024-08-01T10:07:18.024035Z, end-time: 2024-08-01T10:07:28.133890Z, duration: 10, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/bin/python -m mkdocs build --clean --site-dir _build/html --config-file mkdocs.yml
INFO     -  Cleaning site directory
INFO     -  Building documentation to directory: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/checkouts/latest/_build/html
INFO     -  The following pages exist in the docs directory, but are not included in the "nav" configuration:
  - overview.md
  - development/advanced.md
  - development/contributing_to_gitlab.md
  - includes/abbreviations.md
WARNING  -  Documentation file 'development/configuration.md' contains a link to 'reference/xfel-calibrate/calibrate.md' which is not found in the documentation files.
WARNING  -  Documentation file 'development/workflow.md' contains a link to 'development/SUMMARY.md' which is not found in the documentation files.
WARNING  -  Documentation file 'development/workflow.md' contains a link to 'reference/src/cal_tools/files.md' which is not found in the documentation files.
WARNING  -  Documentation file 'operation/troubleshooting.md' contains a link to 'operation/max-exfl-cal001.desy.de:8008' which is not found in the documentation files.
WARNING  -  Documentation file 'operation/troubleshooting.md' contains a link to 'operation/operation/webservice.md' which is not found in the documentation files.
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:49: No type or annotation for parameter 'run'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:49: Parameter 'run' does not appear in the function signature
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:383: No type or annotation for returned value 'bool'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:451: No type or annotation for returned value 'float'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:418: No type or annotation for returned value 'int'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:395: No type or annotation for returned value 'list'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:441: No type or annotation for returned value 'float'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:401: No type or annotation for returned value 'float'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/agipdlib.py:428: No type or annotation for returned value 'int'
ERROR    -  griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
ERROR    -  griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
ERROR    -  griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
ERROR    -  griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:296: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:120: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:573: No type or annotation for returned value 'DICT'
ERROR    -  griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
ERROR    -  griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
ERROR    -  griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:446: No type or annotation for parameter '**condition_params'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:446: Parameter '**condition_params' does not appear in the function signature
ERROR    -  griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
ERROR    -  griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:622: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:514: Failed to get 'name: description' pair from 'Any further keyword arguments are passed on to'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:515: Failed to get 'name: description' pair from 'CalibrationClient.__init__().'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:518: No type or annotation for returned value 1
ERROR    -  griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
ERROR    -  griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface.py:969: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/calcat_interface2.py:868: Parameter 'ccvs_url' does not appear in the function signature
ERROR    -  griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/constants.py:1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/constants.py:90: Parameter 'const_path' does not appear in the function signature
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/constants.py:95: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/constants.py:44: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:545: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:472: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:501: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:232: No type or annotation for returned value 1
ERROR    -  griffe: Failed to parse annotation from 'Tuple' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:179: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:249: No type or annotation for returned value 1
ERROR    -  griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:274: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:356: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:135: Parameter 'args,' does not appear in the function signature
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:140: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:298: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:315: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:620: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:590: No type or annotation for parameter 'kwargs'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:594: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:23: No type or annotation for returned value 1
ERROR    -  griffe: Failed to parse annotation from 'BoolOp' node at /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:70: No type or annotation for yielded value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/files.py:43: No type or annotation for yielded value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/tools.py:1059: No type or annotation for returned value 'str'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/gotthard2/gotthard2lib.py:71: No type or annotation for returned value 'str'
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/jungfrau/jfstrixel.py:75: No type or annotation for returned value 1
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/jungfrau/jungfrau_ff.py:40: Empty parameters section at line 3
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/jungfrau/jungfrau_ff.py:15: Empty parameters section at line 3
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/jungfrau/jungfrau_ff.py:104: Empty parameters section at line 3
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/jungfrau/jungfrau_ff.py:182: Empty parameters section at line 3
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/jungfrau/jungfrau_ff.py:191: Empty returns section at line 11
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/jungfrau/jungfrau_ff.py:256: Empty parameters section at line 3
WARNING  -  griffe: /usr/src/app/checkouts/readthedocs.org/user_builds/european-xfel-offline-calibration/envs/latest/lib/python3.8/site-packages/cal_tools/jungfrau/jungfrau_ff.py:265: Empty returns section at line 11
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