Read the Docs build information
Build id: 28763
Project: pplpattern
Version: update-docu
Commit: 1fe36a7d321a2e83586e90109d1314e49e08217e
Date: 2024-08-21T12:10:24.143374Z
State: finished
Success: True


[rtd-command-info] start-time: 2024-08-21T12:10:25.239421Z, end-time: 2024-08-21T12:10:26.809238Z, duration: 1, exit-code: 0
git clone --no-single-branch --depth 50 http://git.xfel.eu/karaboDevices/pplPattern.git .
Cloning into '.'...

[rtd-command-info] start-time: 2024-08-21T12:10:27.084453Z, end-time: 2024-08-21T12:10:27.154783Z, duration: 0, exit-code: 0
git checkout --force origin/Update/Docu
Note: checking out 'origin/Update/Docu'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:

  git checkout -b <new-branch-name>

HEAD is now at 1fe36a7 troubleshooting/2

[rtd-command-info] start-time: 2024-08-21T12:10:27.241228Z, end-time: 2024-08-21T12:10:27.298367Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2024-08-21T12:10:28.537966Z, end-time: 2024-08-21T12:10:33.157561Z, duration: 4, exit-code: 0
python3.7 -mvirtualenv /usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu
Using base prefix '/home/docs/.pyenv/versions/3.7.3'
New python executable in /usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu/bin/python3.7
Also creating executable in /usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2024-08-21T12:10:33.245247Z, end-time: 2024-08-21T12:10:34.134008Z, duration: 0, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu/bin/python -m pip install --upgrade --no-cache-dir pip
Requirement already satisfied: pip in /usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu/lib/python3.7/site-packages (24.0)

[rtd-command-info] start-time: 2024-08-21T12:10:34.221041Z, end-time: 2024-08-21T12:10:42.606856Z, duration: 8, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu/bin/python -m pip install --upgrade --no-cache-dir jinja2==2.11.3 markupsafe==2.0.1 Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<1.1
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Building wheels for collected packages: mock
  Building wheel for mock (setup.py): started
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  Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23753 sha256=6ff2a30f719a2b9b71e584c2bba722d52f457fa88f1bafdcbd17d8260a453d2d
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Successfully built mock
Installing collected packages: snowballstemmer, pytz, Pygments, mock, docutils, urllib3, sphinxcontrib-serializinghtml, six, setuptools, pillow, packaging, markupsafe, imagesize, idna, future, charset-normalizer, certifi, babel, alabaster, sphinxcontrib-websupport, requests, jinja2, commonmark, sphinx, readthedocs-sphinx-ext, sphinx-rtd-theme, recommonmark
  Attempting uninstall: setuptools
    Found existing installation: setuptools 68.0.0
    Uninstalling setuptools-68.0.0:
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Successfully installed Pygments-2.3.1 alabaster-0.7.13 babel-2.14.0 certifi-2024.7.4 charset-normalizer-3.3.2 commonmark-0.8.1 docutils-0.14 future-1.0.0 idna-3.7 imagesize-1.4.1 jinja2-2.11.3 markupsafe-2.0.1 mock-1.0.1 packaging-24.0 pillow-5.4.1 pytz-2024.1 readthedocs-sphinx-ext-1.0.4 recommonmark-0.5.0 requests-2.31.0 setuptools-41.0.1 six-1.16.0 snowballstemmer-2.2.0 sphinx-1.8.6 sphinx-rtd-theme-0.4.3 sphinxcontrib-serializinghtml-1.1.5 sphinxcontrib-websupport-1.2.4 urllib3-2.0.7

[rtd-command-info] start-time: 2024-08-21T12:10:42.698297Z, end-time: 2024-08-21T12:10:47.569539Z, duration: 4, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu/bin/python -m pip install --exists-action=w --no-cache-dir -r doc/requirements.txt
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[rtd-command-info] start-time: 2024-08-21T12:10:48.298916Z, end-time: 2024-08-21T12:10:48.358655Z, duration: 0, exit-code: 0
cat doc/source/conf.py
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.

# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
import os
import sys

# -- General configuration ------------------------------------------------

# If your documentation needs a minimal Sphinx version, state it here.
#
# needs_sphinx = '1.0'

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
'sphinx.ext.autodoc',
'sphinx.ext.intersphinx',
'sphinx.ext.todo',
'sphinx.ext.mathjax',
'sphinx.ext.ifconfig',
'sphinx.ext.viewcode',
'sphinx.ext.graphviz',
]

# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']

# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
#
# source_suffix = ['.rst', '.md']
source_suffix = '.rst'

# The encoding of source files.
#
# source_encoding = 'utf-8-sig'

# The master toctree document.
master_doc = 'index'

# General information about the project.
project = 'pplPattern'
copyright = '2019, CAS'
author = 'CAS'

# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = '1.0'
# The full version, including alpha/beta/rc tags.
release = '1.0'

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = None

# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
#
# today = ''
#
# Else, today_fmt is used as the format for a strftime call.
#
# today_fmt = '%B %d, %Y'

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This patterns also effect to html_static_path and html_extra_path
exclude_patterns = []

# The reST default role (used for this markup: `text`) to use for all
# documents.
#
# default_role = None

# If true, '()' will be appended to :func: etc. cross-reference text.
#
# add_function_parentheses = True

# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
#
# add_module_names = True

# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#
# show_authors = False

# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'

# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []

# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False

# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = True


# -- Options for HTML output ----------------------------------------------

# The theme to use for HTML and HTML Help pages.  See the documentation for
# a list of builtin themes.
#
html_theme = 'default'

# Theme options are theme-specific and customize the look and feel of a theme
# further.  For a list of options available for each theme, see the
# documentation.
#
# html_theme_options = {}

# Add any paths that contain custom themes here, relative to this directory.
# html_theme_path = []

# The name for this set of Sphinx documents.
# "<project> v<release> documentation" by default.
#
# html_title = 'FXE-Instrument Control Infrastructure v1.0'

# A shorter title for the navigation bar.  Default is the same as html_title.
#
# html_short_title = None

# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
#
# html_logo = None

# The name of an image file (relative to this directory) to use as a favicon of
# the docs.  This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
#
# html_favicon = None

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']

# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the documentation.
#
# html_extra_path = []

# If not None, a 'Last updated on:' timestamp is inserted at every page
# bottom, using the given strftime format.
# The empty string is equivalent to '%b %d, %Y'.
#
# html_last_updated_fmt = None

# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#
# html_use_smartypants = True

# Custom sidebar templates, maps document names to template names.
#
# html_sidebars = {}

# Additional templates that should be rendered to pages, maps page names to
# template names.
#
# html_additional_pages = {}

# If false, no module index is generated.
#
# html_domain_indices = True

# If false, no index is generated.
#
# html_use_index = True

# If true, the index is split into individual pages for each letter.
#
# html_split_index = False

# If true, links to the reST sources are added to the pages.
#
# html_show_sourcelink = True

# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
#
# html_show_sphinx = True

# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
#
# html_show_copyright = True

# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it.  The value of this option must be the
# base URL from which the finished HTML is served.
#
# html_use_opensearch = ''

# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None

# Language to be used for generating the HTML full-text search index.
# Sphinx supports the following languages:
#   'da', 'de', 'en', 'es', 'fi', 'fr', 'h', 'it', 'ja'
#   'nl', 'no', 'pt', 'ro', 'r', 'sv', 'tr', 'zh'
#
# html_search_language = 'en'

# A dictionary with options for the search language support, empty by default.
# 'ja' uses this config value.
# 'zh' user can custom change `jieba` dictionary path.
#
# html_search_options = {'type': 'default'}

# The name of a javascript file (relative to the configuration directory) that
# implements a search results scorer. If empty, the default will be used.
#
# html_search_scorer = 'scorer.js'

# Output file base name for HTML help builder.
htmlhelp_basename = 'CAS-x2TimerMLddoc'

# -- Options for LaTeX output ---------------------------------------------

latex_elements = {
     # The paper size ('letterpaper' or 'a4paper').
     #
     # 'papersize': 'letterpaper',

     # The font size ('10pt', '11pt' or '12pt').
     #
     # 'pointsize': '10pt',

     # Additional stuff for the LaTeX preamble.
     #
     # 'preamble': '',

     # Latex figure (float) alignment
     #
     # 'figure_align': 'htbp',
}

# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
#  author, documentclass [howto, manual, or own class]).
latex_documents = [
    (master_doc, 'pplPattern.tex', 'pplPattern',
     'CAS', 'manual'),
]

# The name of an image file (relative to this directory) to place at the top of
# the title page.
#
# latex_logo = None

# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#
# latex_use_parts = False

# If true, show page references after internal links.
#
# latex_show_pagerefs = False

# If true, show URL addresses after external links.
#
# latex_show_urls = False

# Documents to append as an appendix to all manuals.
#
# latex_appendices = []

# It false, will not define \strong, \code, 	itleref, \crossref ... but only
# \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added
# packages.
#
# latex_keep_old_macro_names = True

# If false, no module index is generated.
#
# latex_domain_indices = True


# -- Options for manual page output ---------------------------------------

# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
    (master_doc, 'pplPattern', 'pplPattern Documentation',
     [author], 1)
]

# If true, show URL addresses after external links.
#
# man_show_urls = False


# -- Options for Texinfo output -------------------------------------------

# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
#  dir menu entry, description, category)
texinfo_documents = [
    (master_doc, 'pplPattern', 'pplPattern Documentation',
     author, 'pplPattern', 'One line description of project.',
     'Miscellaneous'),
]

# Documents to append as an appendix to all manuals.
#
# texinfo_appendices = []

# If false, no module index is generated.
#
# texinfo_domain_indices = True

# How to display URL addresses: 'footnote', 'no', or 'inline'.
#
# texinfo_show_urls = 'footnote'

# If true, do not generate a @detailmenu in the "Top" node's menu.
#
# texinfo_no_detailmenu = False

# set this variable for allowing references
numfig = True




###########################################################################
#          auto-created readthedocs.org specific configuration            #
###########################################################################


#
# The following code was added during an automated build on readthedocs.org
# It is auto created and injected for every build. The result is based on the
# conf.py.tmpl file found in the readthedocs.org codebase:
# https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl
#


import importlib
import sys
import os.path
from six import string_types

from sphinx import version_info

# Get suffix for proper linking to GitHub
# This is deprecated in Sphinx 1.3+,
# as each page can have its own suffix
if globals().get('source_suffix', False):
    if isinstance(source_suffix, string_types):
        SUFFIX = source_suffix
    elif isinstance(source_suffix, (list, tuple)):
        # Sphinx >= 1.3 supports list/tuple to define multiple suffixes
        SUFFIX = source_suffix[0]
    elif isinstance(source_suffix, dict):
        # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes
        SUFFIX = list(source_suffix.keys())[0]  # make a ``list()`` for py2/py3 compatibility
    else:
        # default to .rst
        SUFFIX = '.rst'
else:
    SUFFIX = '.rst'

# Add RTD Static Path. Add to the end because it overwrites previous files.
if not 'html_static_path' in globals():
    html_static_path = []
if os.path.exists('_static'):
    html_static_path.append('_static')

# Add RTD Theme only if they aren't overriding it already
using_rtd_theme = (
    (
        'html_theme' in globals() and
        html_theme in ['default'] and
        # Allow people to bail with a hack of having an html_style
        'html_style' not in globals()
    ) or 'html_theme' not in globals()
)
if using_rtd_theme:
    theme = importlib.import_module('sphinx_rtd_theme')
    html_theme = 'sphinx_rtd_theme'
    html_style = None
    html_theme_options = {}
    if 'html_theme_path' in globals():
        html_theme_path.append(theme.get_html_theme_path())
    else:
        html_theme_path = [theme.get_html_theme_path()]

if globals().get('websupport2_base_url', False):
    websupport2_base_url = 'http://rtd.xfel.eu/websupport'
    websupport2_static_url = '/static/'


#Add project information to the template context.
context = {
    'using_theme': using_rtd_theme,
    'html_theme': html_theme,
    'current_version': "Update/Docu",
    'version_slug': "update-docu",
    'MEDIA_URL': "media/",
    'STATIC_URL': "/static/",
    'PRODUCTION_DOMAIN': "rtd.xfel.eu",
    'versions': [
    ("latest", "/en/latest/"),
    ("update-docu", "/en/update-docu/"),
    ],
    'downloads': [ 
    ("pdf", "//rtd.xfel.eu/downloads/pplpattern/update-docu/pdf/"),
    ("html", "//rtd.xfel.eu/downloads/pplpattern/update-docu/htmlzip/"),
    ("epub", "//rtd.xfel.eu/downloads/pplpattern/update-docu/epub/"),
    ],
    'subprojects': [ 
    ],
    'slug': 'pplpattern',
    'name': u'pplPattern',
    'rtd_language': u'en',
    'programming_language': u'py',
    'canonical_url': 'http://rtd.xfel.eu/docs/pplpattern/en/latest/',
    'analytics_code': 'None',
    'single_version': False,
    'conf_py_path': '/doc/source/',
    'api_host': 'http://rtd.xfel.eu',
    'github_user': 'None',
    'proxied_api_host': '/_',
    'github_repo': 'None',
    'github_version': 'Update/Docu',
    'display_github': False,
    'bitbucket_user': 'None',
    'bitbucket_repo': 'None',
    'bitbucket_version': 'Update/Docu',
    'display_bitbucket': False,
    'gitlab_user': 'None',
    'gitlab_repo': 'None',
    'gitlab_version': 'Update/Docu',
    'display_gitlab': False,
    'READTHEDOCS': True,
    'using_theme': (html_theme == "default"),
    'new_theme': (html_theme == "sphinx_rtd_theme"),
    'source_suffix': SUFFIX,
    'ad_free': False,
    'docsearch_disabled': False,
    'user_analytics_code': '',
    'global_analytics_code': 'None',
    'commit': '1fe36a7d',
}




if 'html_context' in globals():
    
    html_context.update(context)
    
else:
    html_context = context

# Add custom RTD extension
if 'extensions' in globals():
    # Insert at the beginning because it can interfere
    # with other extensions.
    # See https://github.com/rtfd/readthedocs.org/pull/4054
    extensions.insert(0, "readthedocs_ext.readthedocs")
else:
    extensions = ["readthedocs_ext.readthedocs"]

# Add External version warning banner to the external version documentation
if 'branch' == 'external':
    extensions.insert(1, "readthedocs_ext.external_version_warning")

project_language = 'en'

# User's Sphinx configurations
language_user = globals().get('language', None)
latex_engine_user = globals().get('latex_engine', None)
latex_elements_user = globals().get('latex_elements', None)

# Remove this once xindy gets installed in Docker image and XINDYOPS
# env variable is supported
# https://github.com/rtfd/readthedocs-docker-images/pull/98
latex_use_xindy = False

chinese = any([
    language_user in ('zh_CN', 'zh_TW'),
    project_language in ('zh_CN', 'zh_TW'),
])

japanese = any([
    language_user == 'ja',
    project_language == 'ja',
])

if chinese:
    latex_engine = latex_engine_user or 'xelatex'

    latex_elements_rtd = {
        'preamble': '\\usepackage[UTF8]{ctex}\n',
    }
    latex_elements = latex_elements_user or latex_elements_rtd
elif japanese:
    latex_engine = latex_engine_user or 'platex'

# Make sure our build directory is always excluded
exclude_patterns = globals().get('exclude_patterns', [])
exclude_patterns.extend(['_build'])

[rtd-command-info] start-time: 2024-08-21T12:10:48.444469Z, end-time: 2024-08-21T12:10:49.422839Z, duration: 0, exit-code: 0
python /usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu/bin/sphinx-build -T -E -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html
Running Sphinx v5.3.0
WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English).
making output directory... done
WARNING: html_static_path entry '_static' does not exist
building [mo]: targets for 0 po files that are out of date
building [readthedocs]: targets for 6 source files that are out of date
updating environment: [new config] 6 added, 0 changed, 0 removed
reading sources... [ 16%] index
reading sources... [ 33%] introduction
reading sources... [ 50%] running
reading sources... [ 66%] scenes
reading sources... [ 83%] server_startup
reading sources... [100%] troubleshooting

looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [ 16%] index
writing output... [ 33%] introduction
writing output... [ 50%] running
writing output... [ 66%] scenes
writing output... [ 83%] server_startup
writing output... [100%] troubleshooting

generating indices... genindex done
writing additional pages... search done
copying images... [ 25%] _images/pplPattern_editor.png
copying images... [ 50%] _images/pplPattern_nodes.png
copying images... [ 75%] _images/Scene_periodic_pattern.png
copying images... [100%] _images/pplPattern_arbitrary_scene.png

copying static files... done
copying readthedocs static files... done
copying searchtools... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 2 warnings.

The HTML pages are in _build/html.

[rtd-command-info] start-time: 2024-08-21T12:10:49.532792Z, end-time: 2024-08-21T12:10:50.395032Z, duration: 0, exit-code: 0
python /usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu/bin/sphinx-build -T -b readthedocssinglehtmllocalmedia -d _build/doctrees-readthedocssinglehtmllocalmedia -D language=en . _build/localmedia
Running Sphinx v5.3.0
WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English).
making output directory... done
WARNING: html_static_path entry '_static' does not exist
building [mo]: targets for 0 po files that are out of date
building [readthedocssinglehtmllocalmedia]: all documents
updating environment: [new config] 6 added, 0 changed, 0 removed
reading sources... [ 16%] index
reading sources... [ 33%] introduction
reading sources... [ 50%] running
reading sources... [ 66%] scenes
reading sources... [ 83%] server_startup
reading sources... [100%] troubleshooting

looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
assembling single document... introduction server_startup running scenes troubleshooting done
writing... done
writing additional files... done
copying images... [ 25%] _images/pplPattern_editor.png
copying images... [ 50%] _images/pplPattern_nodes.png
copying images... [ 75%] _images/Scene_periodic_pattern.png
copying images... [100%] _images/pplPattern_arbitrary_scene.png

copying static files... done
copying readthedocs static files... done
copying extra files... done
dumping object inventory... done
build succeeded, 2 warnings.

The HTML page is in _build/localmedia.

[rtd-command-info] start-time: 2024-08-21T12:10:50.511815Z, end-time: 2024-08-21T12:10:51.269908Z, duration: 0, exit-code: 0
python /usr/src/app/checkouts/readthedocs.org/user_builds/pplpattern/envs/update-docu/bin/sphinx-build -b latex -D language=en -d _build/doctrees . _build/latex
Running Sphinx v5.3.0
WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English).
making output directory... done
WARNING: html_static_path entry '_static' does not exist
building [mo]: targets for 0 po files that are out of date
building [latex]: all documents
updating environment: [new config] 6 added, 0 changed, 0 removed
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reading sources... [ 33%] introduction
reading sources... [ 50%] running
reading sources... [ 66%] scenes
reading sources... [ 83%] server_startup
reading sources... [100%] troubleshooting

looking for now-outdated files... none found
pickling environment... done
checking consistency... done
processing pplPattern.tex... index introduction server_startup running scenes troubleshooting 
resolving references...
done
writing... done
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copying images... [100%] _images/pplPattern_arbitrary_scene.png

copying TeX support files... copying TeX support files...
done
build succeeded, 2 warnings.

The LaTeX files are in _build/latex.
Run 'make' in that directory to run these through (pdf)latex
(use `make latexpdf' here to do that automatically).

[rtd-command-info] start-time: 2024-08-21T12:10:51.812594Z, end-time: 2024-08-21T12:10:51.869588Z, duration: 0, exit-code: 0
cat latexmkrc
$latex = 'latex ' . $ENV{'LATEXOPTS'} . ' %O %S';
$pdflatex = 'pdflatex ' . $ENV{'LATEXOPTS'} . ' %O %S';
$lualatex = 'lualatex ' . $ENV{'LATEXOPTS'} . ' %O %S';
$xelatex = 'xelatex --no-pdf ' . $ENV{'LATEXOPTS'} . ' %O %S';
$makeindex = 'makeindex -s python.ist %O -o %D %S';
add_cus_dep( "glo", "gls", 0, "makeglo" );
sub makeglo {
 return system( "makeindex -s gglo.ist -o '$_[0].gls' '$_[0].glo'" );
}

[rtd-command-info] start-time: 2024-08-21T12:10:51.955161Z, end-time: 2024-08-21T12:10:53.161449Z, duration: 1, exit-code: 0
latexmk -r latexmkrc -pdf -f -dvi- -ps- -jobname=pplpattern -interaction=nonstopmode
Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 1, <GEN1> chunk 1.
Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 2, <GEN1> chunk 1.
Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 3, <GEN1> chunk 1.
Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 4, <GEN1> chunk 1.
Subroutine makeglo redefined at (eval 11) line 7, <GEN2> chunk 1.
Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 1, <GEN2> chunk 1.
Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 2, <GEN2> chunk 1.
Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 3, <GEN2> chunk 1.
Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 4, <GEN2> chunk 1.
Latexmk: This is Latexmk, John Collins, 1 January 2015, version: 4.41.
File::Glob::glob() will disappear in perl 5.30. Use File::Glob::bsd_glob() instead. at /usr/bin/latexmk line 7482.
Rule 'pdflatex': Rules & subrules not known to be previously run:
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Rule 'pdflatex': The following rules & subrules became out-of-date:
      'pdflatex'
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Run number 1 of rule 'pdflatex'
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Running 'pdflatex   -interaction=nonstopmode -recorder --jobname="pplpattern"  "pplPattern.tex"'
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Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017/Debian) (preloaded format=pdflatex)
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entering extended mode
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(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] [2] [1] [2] [1] [2]
Chapter 1.

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[]\T1/qtm/m/n/10 The PPL pat-tern con-fig-u-ra-tion is saved in the DOOCS serve
r XFEL.UTIL/BUNCH_PATTERN/PATTERN_BUILDER. 
[3] [4]
Chapter 2.
[5] [6]
Chapter 3.

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[7] [8 <./pplPattern_editor.png (PNG copy)>] [9 <./pplPattern_nodes.png (PNG co
py)>] [10]
Chapter 4.

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[12 <./pplPattern_arbitrary_scene.png (PNG copy)>] [13] [14]
Chapter 5.
[15] [16]
Chapter 6.
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[17] (./pplpattern.aux)

Package rerunfilecheck Warning: File `pplpattern.out' has changed.
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 )
(see the transcript file for additional information){/usr/share/texmf/fonts/enc
/dvips/tex-gyre/q-ec.enc}{/usr/share/texmf/fonts/enc/dvips/tex-gyre/q-ts1.enc}<
/usr/share/texmf/fonts/type1/public/tex-gyre/qhvb.pfb></usr/share/texmf/fonts/t
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Output written on pplpattern.pdf (21 pages, 726663 bytes).
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nts/map/pdftex/updmap/pdftex.map}] [2] (./pplpattern.toc) [1] [2] [1] [2]
Chapter 1.

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[]\T1/qtm/m/n/10 The PPL pat-tern con-fig-u-ra-tion is saved in the DOOCS serve
r XFEL.UTIL/BUNCH_PATTERN/PATTERN_BUILDER. 
[3] [4]
Chapter 2.
[5] [6]
Chapter 3.
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Chapter 4.
[11 <./Scene_periodic_pattern.png (PNG copy)>] [12 <./pplPattern_arbitrary_scen
e.png (PNG copy)>] [13] [14]
Chapter 5.
[15] [16]
Chapter 6.
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(see the transcript file for additional information){/usr/share/texmf/fonts/enc
/dvips/tex-gyre/q-ec.enc}{/usr/share/texmf/fonts/enc/dvips/tex-gyre/q-ts1.enc}<
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ype1/public/tex-gyre/qhvbi.pfb></usr/share/texmf/fonts/type1/public/tex-gyre/qt
mb.pfb></usr/share/texmf/fonts/type1/public/tex-gyre/qtmbi.pfb></usr/share/texm
f/fonts/type1/public/tex-gyre/qtmr.pfb></usr/share/texmf/fonts/type1/public/tex
-gyre/qtmri.pfb>
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Running 'pdflatex   -interaction=nonstopmode -recorder --jobname="pplpattern"  "pplPattern.tex"'
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Chapter 1.

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[]\T1/qtm/m/n/10 The PPL pat-tern con-fig-u-ra-tion is saved in the DOOCS serve
r XFEL.UTIL/BUNCH_PATTERN/PATTERN_BUILDER. 
[3] [4]
Chapter 2.
[5] [6]
Chapter 3.
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Chapter 4.
[11 <./Scene_periodic_pattern.png (PNG copy)>] [12 <./pplPattern_arbitrary_scen
e.png (PNG copy)>] [13] [14]
Chapter 5.
[15] [16]
Chapter 6.
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/dvips/tex-gyre/q-ec.enc}{/usr/share/texmf/fonts/enc/dvips/tex-gyre/q-ts1.enc}<
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mb.pfb></usr/share/texmf/fonts/type1/public/tex-gyre/qtmbi.pfb></usr/share/texm
f/fonts/type1/public/tex-gyre/qtmr.pfb></usr/share/texmf/fonts/type1/public/tex
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