Read the Docs build information
Build id: 29582
Project: scs-documentation
Version: latest
Commit: 4e325b9bf8e554e586b9e212da8be91bb44b9a2e
Date: 2025-02-05T15:23:31.312493Z
State: finished
Success: True


[rtd-command-info] start-time: 2025-02-05T15:23:32.427414Z, end-time: 2025-02-05T15:23:37.708587Z, duration: 5, exit-code: 0
git clone --no-single-branch --depth 50 http://git.xfel.eu/SCS/documentation.git .
Cloning into '.'...

[rtd-command-info] start-time: 2025-02-05T15:23:38.025050Z, end-time: 2025-02-05T15:23:38.991405Z, duration: 0, exit-code: 0
git checkout --force origin/master
Note: checking out 'origin/master'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:

  git checkout -b <new-branch-name>

HEAD is now at 4e325b9 Gitlab pages

[rtd-command-info] start-time: 2025-02-05T15:23:39.077306Z, end-time: 2025-02-05T15:23:39.141117Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2025-02-05T15:23:41.213450Z, end-time: 2025-02-05T15:23:45.979759Z, duration: 4, exit-code: 0
python3.7 -mvirtualenv /usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/envs/latest
Using base prefix '/home/docs/.pyenv/versions/3.7.3'
New python executable in /usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/envs/latest/bin/python3.7
Also creating executable in /usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/envs/latest/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2025-02-05T15:23:46.072875Z, end-time: 2025-02-05T15:23:47.032089Z, duration: 0, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/envs/latest/bin/python -m pip install --upgrade --no-cache-dir pip
Requirement already satisfied: pip in /usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/envs/latest/lib/python3.7/site-packages (24.0)

[rtd-command-info] start-time: 2025-02-05T15:23:47.120344Z, end-time: 2025-02-05T15:23:56.049045Z, duration: 8, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/envs/latest/bin/python -m pip install --upgrade --no-cache-dir jinja2==2.11.3 markupsafe==2.0.1 Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<1.1
Collecting jinja2==2.11.3
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Collecting markupsafe==2.0.1
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Collecting Pygments==2.3.1
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Collecting pytz>=2015.7 (from babel!=2.0,>=1.3->sphinx<2)
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Downloading readthedocs_sphinx_ext-1.0.4-py2.py3-none-any.whl (28 kB)
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Downloading six-1.17.0-py2.py3-none-any.whl (11 kB)
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Building wheels for collected packages: mock
  Building wheel for mock (setup.py): started
  Building wheel for mock (setup.py): finished with status 'done'
  Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23753 sha256=b28d2b6b05ce55ba6ffdf0fe81e9db4b026d5d4b6c2957f0e86cc8a5776b7877
  Stored in directory: /tmp/pip-ephem-wheel-cache-2xnpux3h/wheels/7a/94/b1/0fdc5339a5bd487a5cc15421ec200d9ba3e2aa7190e4a727f1
Successfully built mock
Installing collected packages: snowballstemmer, pytz, Pygments, mock, docutils, urllib3, sphinxcontrib-serializinghtml, six, setuptools, pillow, packaging, markupsafe, imagesize, idna, future, charset-normalizer, certifi, babel, alabaster, sphinxcontrib-websupport, requests, jinja2, commonmark, sphinx, readthedocs-sphinx-ext, sphinx-rtd-theme, recommonmark
  Attempting uninstall: setuptools
    Found existing installation: setuptools 68.0.0
    Uninstalling setuptools-68.0.0:
      Successfully uninstalled setuptools-68.0.0
Successfully installed Pygments-2.3.1 alabaster-0.7.13 babel-2.14.0 certifi-2025.1.31 charset-normalizer-3.4.1 commonmark-0.8.1 docutils-0.14 future-1.0.0 idna-3.10 imagesize-1.4.1 jinja2-2.11.3 markupsafe-2.0.1 mock-1.0.1 packaging-24.0 pillow-5.4.1 pytz-2025.1 readthedocs-sphinx-ext-1.0.4 recommonmark-0.5.0 requests-2.31.0 setuptools-41.0.1 six-1.17.0 snowballstemmer-2.2.0 sphinx-1.8.6 sphinx-rtd-theme-0.4.3 sphinxcontrib-serializinghtml-1.1.5 sphinxcontrib-websupport-1.2.4 urllib3-2.0.7

[rtd-command-info] start-time: 2025-02-05T15:23:56.136837Z, end-time: 2025-02-05T15:23:57.315541Z, duration: 1, exit-code: 0
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/envs/latest/bin/python -m pip install --exists-action=w --no-cache-dir -r requirements.txt
Collecting urllib3<2.0.0 (from -r requirements.txt (line 1))
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Downloading urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
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Installing collected packages: urllib3
  Attempting uninstall: urllib3
    Found existing installation: urllib3 2.0.7
    Uninstalling urllib3-2.0.7:
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Successfully installed urllib3-1.26.20

[rtd-command-info] start-time: 2025-02-05T15:23:58.036097Z, end-time: 2025-02-05T15:23:58.098426Z, duration: 0, exit-code: 0
cat conf.py
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
#
# SCS documentation documentation build configuration file, created by
# sphinx-quickstart on Mon Dec 11 12:34:44 2017.
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.

import sys
import os

# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
sys.path.insert(0, os.path.abspath('.'))

# -- General configuration ------------------------------------------------

# If your documentation needs a minimal Sphinx version, state it here.
#needs_sphinx = '1.0'

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
    'sphinx.ext.mathjax',
    #'excelext',
    'videoext',
]

try:
    import openpyxl
except ImportError:
    pass
else:
    extensions.append('excelext')

# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']
numfig = False

# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
# source_suffix = ['.rst', '.md']
source_suffix = '.rst'

# The encoding of source files.
#source_encoding = 'utf-8-sig'

# The master toctree document.
master_doc = 'index'

# General information about the project.
project = 'SCS documentation'
copyright = '2017, European XFEL GmbH'
author = 'SCS group at XFEL'

# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = '0.1'
# The full version, including alpha/beta/rc tags.
release = '0.1'

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = None

# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
#today = ''
# Else, today_fmt is used as the format for a strftime call.
#today_fmt = '%B %d, %Y'

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
exclude_patterns = ['_build']

# The reST default role (used for this markup: `text`) to use for all
# documents.
#default_role = None

# If true, '()' will be appended to :func: etc. cross-reference text.
#add_function_parentheses = True

# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
#add_module_names = True

# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#show_authors = False

# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'

# A list of ignored prefixes for module index sorting.
#modindex_common_prefix = []

# If true, keep warnings as "system message" paragraphs in the built documents.
#keep_warnings = False

# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = False


# -- Options for HTML output ----------------------------------------------

# The theme to use for HTML and HTML Help pages.  See the documentation for
# a list of builtin themes.
html_theme = 'alabaster'

# Theme options are theme-specific and customize the look and feel of a theme
# further.  For a list of options available for each theme, see the
# documentation.
#html_theme_options = {}

# Add any paths that contain custom themes here, relative to this directory.
#html_theme_path = []

# The name for this set of Sphinx documents.  If None, it defaults to
# "<project> v<release> documentation".
#html_title = None

# A shorter title for the navigation bar.  Default is the same as html_title.
#html_short_title = None

# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
#html_logo = None

# The name of an image file (relative to this directory) to use as a favicon of
# the docs.  This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
#html_favicon = None

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']

# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the documentation.
#html_extra_path = []

# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,
# using the given strftime format.
#html_last_updated_fmt = '%b %d, %Y'

# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#html_use_smartypants = True

# Custom sidebar templates, maps document names to template names.
#html_sidebars = {}

# Additional templates that should be rendered to pages, maps page names to
# template names.
#html_additional_pages = {}

# If false, no module index is generated.
#html_domain_indices = True

# If false, no index is generated.
#html_use_index = True

# If true, the index is split into individual pages for each letter.
#html_split_index = False

# If true, links to the reST sources are added to the pages.
#html_show_sourcelink = True

# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
#html_show_sphinx = True

# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
#html_show_copyright = True

# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it.  The value of this option must be the
# base URL from which the finished HTML is served.
#html_use_opensearch = ''

# This is the file name suffix for HTML files (e.g. ".xhtml").
#html_file_suffix = None

# Language to be used for generating the HTML full-text search index.
# Sphinx supports the following languages:
#   'da', 'de', 'en', 'es', 'fi', 'fr', 'h', 'it', 'ja'
#   'nl', 'no', 'pt', 'ro', 'r', 'sv', 'tr'
#html_search_language = 'en'

# A dictionary with options for the search language support, empty by default.
# Now only 'ja' uses this config value
#html_search_options = {'type': 'default'}

# The name of a javascript file (relative to the configuration directory) that
# implements a search results scorer. If empty, the default will be used.
#html_search_scorer = 'scorer.js'

# Output file base name for HTML help builder.
htmlhelp_basename = 'SCSdocumentationdoc'

# -- Options for LaTeX output ---------------------------------------------

latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
#'papersize': 'letterpaper',

# The font size ('10pt', '11pt' or '12pt').
#'pointsize': '10pt',

# Additional stuff for the LaTeX preamble.
#'preamble': '',

# Latex figure (float) alignment
#'figure_align': 'htbp',
}

# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
#  author, documentclass [howto, manual, or own class]).
latex_documents = [
    (master_doc, 'SCSdocumentation.tex', 'SCS documentation Documentation',
     'Martin Teichmann', 'manual'),
]

# The name of an image file (relative to this directory) to place at the top of
# the title page.
#latex_logo = None

# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#latex_use_parts = False

# If true, show page references after internal links.
#latex_show_pagerefs = False

# If true, show URL addresses after external links.
#latex_show_urls = False

# Documents to append as an appendix to all manuals.
#latex_appendices = []

# If false, no module index is generated.
#latex_domain_indices = True


# -- Options for manual page output ---------------------------------------

# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
    (master_doc, 'scsdocumentation', 'SCS documentation Documentation',
     [author], 1)
]

# If true, show URL addresses after external links.
#man_show_urls = False


# -- Options for Texinfo output -------------------------------------------

# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
#  dir menu entry, description, category)
texinfo_documents = [
    (master_doc, 'SCSdocumentation', 'SCS documentation Documentation',
     author, 'SCSdocumentation', 'One line description of project.',
     'Miscellaneous'),
]

# Documents to append as an appendix to all manuals.
#texinfo_appendices = []

# If false, no module index is generated.
#texinfo_domain_indices = True

# How to display URL addresses: 'footnote', 'no', or 'inline'.
#texinfo_show_urls = 'footnote'

# If true, do not generate a @detailmenu in the "Top" node's menu.
#texinfo_no_detailmenu = False




###########################################################################
#          auto-created readthedocs.org specific configuration            #
###########################################################################


#
# The following code was added during an automated build on readthedocs.org
# It is auto created and injected for every build. The result is based on the
# conf.py.tmpl file found in the readthedocs.org codebase:
# https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl
#


import importlib
import sys
import os.path
from six import string_types

from sphinx import version_info

# Get suffix for proper linking to GitHub
# This is deprecated in Sphinx 1.3+,
# as each page can have its own suffix
if globals().get('source_suffix', False):
    if isinstance(source_suffix, string_types):
        SUFFIX = source_suffix
    elif isinstance(source_suffix, (list, tuple)):
        # Sphinx >= 1.3 supports list/tuple to define multiple suffixes
        SUFFIX = source_suffix[0]
    elif isinstance(source_suffix, dict):
        # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes
        SUFFIX = list(source_suffix.keys())[0]  # make a ``list()`` for py2/py3 compatibility
    else:
        # default to .rst
        SUFFIX = '.rst'
else:
    SUFFIX = '.rst'

# Add RTD Static Path. Add to the end because it overwrites previous files.
if not 'html_static_path' in globals():
    html_static_path = []
if os.path.exists('_static'):
    html_static_path.append('_static')

# Add RTD Theme only if they aren't overriding it already
using_rtd_theme = (
    (
        'html_theme' in globals() and
        html_theme in ['default'] and
        # Allow people to bail with a hack of having an html_style
        'html_style' not in globals()
    ) or 'html_theme' not in globals()
)
if using_rtd_theme:
    theme = importlib.import_module('sphinx_rtd_theme')
    html_theme = 'sphinx_rtd_theme'
    html_style = None
    html_theme_options = {}
    if 'html_theme_path' in globals():
        html_theme_path.append(theme.get_html_theme_path())
    else:
        html_theme_path = [theme.get_html_theme_path()]

if globals().get('websupport2_base_url', False):
    websupport2_base_url = 'http://rtd.xfel.eu/websupport'
    websupport2_static_url = '/static/'


#Add project information to the template context.
context = {
    'using_theme': using_rtd_theme,
    'html_theme': html_theme,
    'current_version': "latest",
    'version_slug': "latest",
    'MEDIA_URL': "media/",
    'STATIC_URL': "/static/",
    'PRODUCTION_DOMAIN': "rtd.xfel.eu",
    'versions': [
    ("latest", "/en/latest/"),
    ("test", "/en/test/"),
    ],
    'downloads': [ 
    ("html", "//rtd.xfel.eu/downloads/scs-documentation/latest/htmlzip/"),
    ],
    'subprojects': [ 
    ],
    'slug': 'scs-documentation',
    'name': u'SCS documentation',
    'rtd_language': u'en',
    'programming_language': u'words',
    'canonical_url': 'http://rtd.xfel.eu/docs/scs-documentation/en/latest/',
    'analytics_code': 'None',
    'single_version': False,
    'conf_py_path': '/',
    'api_host': 'http://rtd.xfel.eu',
    'github_user': 'None',
    'proxied_api_host': '/_',
    'github_repo': 'None',
    'github_version': 'master',
    'display_github': False,
    'bitbucket_user': 'None',
    'bitbucket_repo': 'None',
    'bitbucket_version': 'master',
    'display_bitbucket': False,
    'gitlab_user': 'None',
    'gitlab_repo': 'None',
    'gitlab_version': 'master',
    'display_gitlab': False,
    'READTHEDOCS': True,
    'using_theme': (html_theme == "default"),
    'new_theme': (html_theme == "sphinx_rtd_theme"),
    'source_suffix': SUFFIX,
    'ad_free': False,
    'docsearch_disabled': False,
    'user_analytics_code': '',
    'global_analytics_code': 'None',
    'commit': '4e325b9b',
}




if 'html_context' in globals():
    
    html_context.update(context)
    
else:
    html_context = context

# Add custom RTD extension
if 'extensions' in globals():
    # Insert at the beginning because it can interfere
    # with other extensions.
    # See https://github.com/rtfd/readthedocs.org/pull/4054
    extensions.insert(0, "readthedocs_ext.readthedocs")
else:
    extensions = ["readthedocs_ext.readthedocs"]

# Add External version warning banner to the external version documentation
if 'branch' == 'external':
    extensions.insert(1, "readthedocs_ext.external_version_warning")

project_language = 'en'

# User's Sphinx configurations
language_user = globals().get('language', None)
latex_engine_user = globals().get('latex_engine', None)
latex_elements_user = globals().get('latex_elements', None)

# Remove this once xindy gets installed in Docker image and XINDYOPS
# env variable is supported
# https://github.com/rtfd/readthedocs-docker-images/pull/98
latex_use_xindy = False

chinese = any([
    language_user in ('zh_CN', 'zh_TW'),
    project_language in ('zh_CN', 'zh_TW'),
])

japanese = any([
    language_user == 'ja',
    project_language == 'ja',
])

if chinese:
    latex_engine = latex_engine_user or 'xelatex'

    latex_elements_rtd = {
        'preamble': '\\usepackage[UTF8]{ctex}\n',
    }
    latex_elements = latex_elements_user or latex_elements_rtd
elif japanese:
    latex_engine = latex_engine_user or 'platex'

# Make sure our build directory is always excluded
exclude_patterns = globals().get('exclude_patterns', [])
exclude_patterns.extend(['_build'])

[rtd-command-info] start-time: 2025-02-05T15:23:58.189196Z, end-time: 2025-02-05T15:24:04.554250Z, duration: 6, exit-code: 0
python /usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/envs/latest/bin/sphinx-build -T -E -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html
Running Sphinx v1.8.6
loading translations [en]... done
making output directory...
building [mo]: targets for 0 po files that are out of date
building [readthedocs]: targets for 91 source files that are out of date
updating environment: 91 added, 0 changed, 0 removed
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reading sources... [  2%] CHEM/index
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reading sources... [  4%] DSSC/index
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reading sources... [  6%] DSSC/venting
reading sources... [  7%] Digitizer/index
reading sources... [  8%] FCCD/chiller
reading sources... [  9%] FCCD/configurations
reading sources... [ 10%] FCCD/index
reading sources... [ 12%] FCCD/interlocks
reading sources... [ 13%] FCCD/pumpvent
reading sources... [ 14%] FFT/EP
reading sources... [ 15%] FFT/FSSS/index
reading sources... [ 16%] FFT/SmarAct/index
reading sources... [ 17%] FFT/THz/index
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reading sources... [ 23%] FFT/diag/index
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reading sources... [ 25%] FFT/electromagnet/magnet-before-20190910
reading sources... [ 26%] FFT/guard/index
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reading sources... [ 30%] FFT/reflectometer/index
reading sources... [ 31%] FFT/ventpump
reading sources... [ 32%] GOTTHARD/index
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reading sources... [ 36%] LIN/index
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reading sources... [ 39%] OL/GaussianBeam/gaussian_beam
reading sources... [ 40%] OL/ILH_information
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reading sources... [ 42%] OL/PP/general
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reading sources... [ 46%] OL/index
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reading sources... [ 48%] README
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reading sources... [ 54%] SA3/mono
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reading sources... [ 60%] Software/gitlab
reading sources... [ 61%] Software/index
reading sources... [ 62%] Software/infrastructure
reading sources... [ 63%] Software/karabo
reading sources... [ 64%] Software/karaboFAI
reading sources... [ 65%] Software/offline
reading sources... [ 67%] Software/online
reading sources... [ 68%] TIM/MPOD-MCPs
reading sources... [ 69%] TIM/index
reading sources... [ 70%] VAC/index
reading sources... [ 71%] VAC/scrollsaver
reading sources... [ 72%] VAC/venting
reading sources... [ 73%] Varia/FEL
reading sources... [ 74%] Varia/Links
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reading sources... [ 76%] Varia/beamline-distances
reading sources... [ 78%] Varia/bunchpattern
reading sources... [ 79%] Varia/control-network
reading sources... [ 80%] Varia/endofshift
reading sources... [ 81%] Varia/office-network-ports
reading sources... [ 82%] Varia/phonelist
reading sources... [ 83%] Varia/radiation-protection
reading sources... [ 84%] Varia/startup
reading sources... [ 85%] Varia/trigger
reading sources... [ 86%] Varia/writingdoc
reading sources... [ 87%] XGM/description
reading sources... [ 89%] XGM/howto
reading sources... [ 90%] XGM/index
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reading sources... [ 92%] XOX/index
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reading sources... [ 96%] XRD/sample_cooling
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reading sources... [100%] index

/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/index.rst:29: WARNING: duplicate label experimental-3d, other instance in /usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/EP.rst
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/interlock.rst:113: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/LIN/index.rst:221: WARNING: Bullet list ends without a blank line; unexpected unindent.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/LIN/index.rst:252: WARNING: Unexpected section title.

In-vacuum (Smaract) mirrors
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/OL/PP/time_zero_manual.rst:310: WARNING: Bullet list ends without a blank line; unexpected unindent.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/OL/PP/time_zero_manual.rst:371: WARNING: Duplicate explicit target name: "ol_on_pbn".
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/OL/PP/time_zero_manual.rst:377: WARNING: Duplicate explicit target name: "fel_on_pbn".
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/OL/PP/time_zero_manual.rst:369: WARNING: Duplicate target name, cannot be used as a unique reference: "ol_on_pbn".
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/OL/PP/time_zero_manual.rst:369: WARNING: Duplicate target name, cannot be used as a unique reference: "fel_on_pbn".
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/Software/karaboFAI.rst:28: WARNING: Enumerated list ends without a blank line; unexpected unindent.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/Software/online.rst:: WARNING: image file not readable: Software/images/xas_online.png
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/Varia/startup.rst:92: WARNING: Unexpected indentation.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/Varia/startup.rst:93: WARNING: Block quote ends without a blank line; unexpected unindent.
looking for now-outdated files... none found
pickling environment... done
checking consistency... /usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/README.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
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writing output... [  3%] DPS/index
writing output... [  4%] DSSC/index
writing output... [  5%] DSSC/pumping
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writing output... [  7%] Digitizer/index
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writing output... [ 10%] FCCD/index
writing output... [ 12%] FCCD/interlocks
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writing output... [ 16%] FFT/SmarAct/index
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writing output... [ 24%] FFT/electromagnet/index
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writing output... [ 26%] FFT/guard/index
writing output... [ 27%] FFT/index
writing output... [ 28%] FFT/interlock
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writing output... [ 30%] FFT/reflectometer/index
writing output... [ 31%] FFT/ventpump
writing output... [ 32%] GOTTHARD/index
writing output... [ 34%] HRIXS/index
writing output... [ 35%] KBS/index
writing output... [ 36%] LIN/index
writing output... [ 37%] LaserLab/index
writing output... [ 38%] OL/AFS/index
writing output... [ 39%] OL/GaussianBeam/gaussian_beam
writing output... [ 40%] OL/ILH_information
writing output... [ 41%] OL/OPA/index
writing output... [ 42%] OL/PP/general
writing output... [ 43%] OL/PP/synchronization
writing output... [ 45%] OL/PP/time_zero_manual
writing output... [ 46%] OL/index
writing output... [ 47%] PhysLab/index
writing output... [ 48%] README
writing output... [ 49%] SA3/BAM/bam
writing output... [ 50%] SA3/gatt
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writing output... [ 61%] Software/index
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writing output... [ 80%] Varia/endofshift
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writing output... [ 83%] Varia/radiation-protection
writing output... [ 84%] Varia/startup
writing output... [ 85%] Varia/trigger
writing output... [ 86%] Varia/writingdoc
writing output... [ 87%] XGM/description
writing output... [ 89%] XGM/howto
writing output... [ 90%] XGM/index
writing output... [ 91%] XGM/interlocks
writing output... [ 92%] XOX/index
writing output... [ 93%] XRD/feedthroughs
writing output... [ 94%] XRD/index
writing output... [ 95%] XRD/sample_alignment
writing output... [ 96%] XRD/sample_cooling
writing output... [ 97%] XRD/sample_transfert
writing output... [ 98%] XRD/venting
writing output... [100%] index

/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/DPS/index.rst:10: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/EP.rst:21: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/EP.rst:33: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/THz/index.rst:9: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/TZPG/index.rst:10: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/clusterflange.rst:9: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/electromagnet/magnet-before-20190910.rst:37: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/electromagnet/magnet-before-20190910.rst:46: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/FFT/guard/index.rst:10: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/Software/karabo.rst:38: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/TIM/index.rst:8: WARNING: numfig is disabled. :numref: is ignored.
/usr/src/app/checkouts/readthedocs.org/user_builds/scs-documentation/checkouts/latest/TIM/index.rst:34: WARNING: numfig is disabled. :numref: is ignored.
generating indices... genindex
writing additional pages... search
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copying images... [  1%] ALAS/Images/ALAS_enclosure_schematics.png
copying images... [  1%] ALAS/Images/ALAS_enclosure_photo_annotated.png
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In-vacuum (Smaract) mirrors
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